Template:STRUCTURE 2hdn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "Template:STRUCTURE 2hdn" [edit=sysop:move=sysop])
Current revision (20:52, 20 October 2012) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2hdn, resolution 2.800&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2hdn]], [[Resolution|resolution]] 2.80&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE=
+
|LIGAND= <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TAC:TETRACYCLINE'>TAC</scene>
-
|LIGAND= <scene name='pdbligand=GDP:GUANOSINE-5&#39;-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TAC:TETRACYCLINE'>TAC</scene>
+
-
|ACTIVITY=
+
-
|GENE=
+
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK00049 PRK00049], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01884 EF_Tu], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03707 EFTU_III], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03697 EFTU_II]</span>
+
|RELATEDENTRY=[[2hcj|2hcj]]
|RELATEDENTRY=[[2hcj|2hcj]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hdn OCA], [http://www.ebi.ac.uk/pdbsum/2hdn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2hdn RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hdn OCA], [http://www.ebi.ac.uk/pdbsum/2hdn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2hdn RCSB]</span>
 +
|FUNCTION={{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0005525 | text = GTP binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0003746 | text = translation elongation factor activity}}{{GO|id=GO:0003924 | text = GTPase activity}}
 +
|PROCESS={{GO|id=GO:0006414 | text = translational elongation}}{{GO|id=GO:0006412 | text = translation}}{{GO|id=GO:0046677 | text = response to antibiotic}}
 +
|COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0005622 | text = intracellular}}
 +
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000795 Ipr000795], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004161 Ipr004161], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009000 Ipr009000], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004160 Ipr004160], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005225 Ipr005225], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004541 Ipr004541], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009001 Ipr009001]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00009 PF00009], [http://pfam.sanger.ac.uk/family?acc=PF03144 PF03144], [http://pfam.sanger.ac.uk/family?acc=PF03143 PF03143]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A6N1 P0A6N1], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q83JC4 Q83JC4]</span>
 +
|uPDB=2HDN|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_2hdn_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>C [x]</text>
 +
<name>jmb_2hdn_C</name>
 +
<title>toggle chain C</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>E [x]</text>
 +
<name>jmb_2hdn_E</name>
 +
<title>toggle chain E</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>G [x]</text>
 +
<name>jmb_2hdn_G</name>
 +
<title>toggle chain G</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>I [x]</text>
 +
<name>jmb_2hdn_I</name>
 +
<title>toggle chain I</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>K [x]</text>
 +
<name>jmb_2hdn_K</name>
 +
<title>toggle chain K</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_2hdn_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>D [x]</text>
 +
<name>jmb_2hdn_D</name>
 +
<title>toggle chain D</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>F [x]</text>
 +
<name>jmb_2hdn_F</name>
 +
<title>toggle chain F</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>H [x]</text>
 +
<name>jmb_2hdn_H</name>
 +
<title>toggle chain H</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>J [x]</text>
 +
<name>jmb_2hdn_J</name>
 +
<title>toggle chain J</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>L [x]</text>
 +
<name>jmb_2hdn_L</name>
 +
<title>toggle chain L</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
}}
}}

Current revision

Drag the structure with the mouse to rotate
2hdn, resolution 2.80Å ()
Ligands: , ,
Related: 2hcj
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_2hdn"
Personal tools