This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hkx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:33, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hkx.jpg|left|200px]]
 
-
<!--
+
==Structure of CooA mutant (N127L/S128L) from Carboxydothermus hydrogenoformans==
-
The line below this paragraph, containing "STRUCTURE_2hkx", creates the "Structure Box" on the page.
+
<StructureSection load='2hkx' size='340' side='right'caption='[[2hkx]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2hkx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Carboxydothermus_hydrogenoformans Carboxydothermus hydrogenoformans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HKX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HKX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
{{STRUCTURE_2hkx| PDB=2hkx | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hkx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hkx OCA], [https://pdbe.org/2hkx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hkx RCSB], [https://www.ebi.ac.uk/pdbsum/2hkx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hkx ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Structure of CooA mutant (N127L/S128L) from Carboxydothermus hydrogenoformans'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q3AB29_CARHZ Q3AB29_CARHZ]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2HKX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Carboxydothermus_hydrogenoformans Carboxydothermus hydrogenoformans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HKX OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hk/2hkx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hkx ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Carboxydothermus hydrogenoformans]]
[[Category: Carboxydothermus hydrogenoformans]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Borjigin, M.]]
+
[[Category: Borjigin M]]
-
[[Category: Kerby, R L.]]
+
[[Category: Kerby RL]]
-
[[Category: Lanz, N D.]]
+
[[Category: Lanz ND]]
-
[[Category: Li, H.]]
+
[[Category: Li H]]
-
[[Category: Poulos, T L.]]
+
[[Category: Poulos TL]]
-
[[Category: Roberts, G P.]]
+
[[Category: Roberts GP]]
-
[[Category: Cooa]]
+
-
[[Category: Heme protein]]
+
-
[[Category: Transcription factor]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 06:24:34 2008''
+

Current revision

Structure of CooA mutant (N127L/S128L) from Carboxydothermus hydrogenoformans

PDB ID 2hkx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hkx"
Personal tools