This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2i3f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:05, 30 August 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2i3f.gif|left|200px]]
 
-
<!--
+
==Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria==
-
The line below this paragraph, containing "STRUCTURE_2i3f", creates the "Structure Box" on the page.
+
<StructureSection load='2i3f' size='340' side='right'caption='[[2i3f]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2i3f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I3F FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i3f OCA], [https://pdbe.org/2i3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i3f RCSB], [https://www.ebi.ac.uk/pdbsum/2i3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i3f ProSAT], [https://www.topsan.org/Proteins/CESG/2i3f TOPSAN]</span></td></tr>
-
{{STRUCTURE_2i3f| PDB=2i3f | SCENE= }}
+
</table>
-
 
+
== Evolutionary Conservation ==
-
'''Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/2i3f_consurf.spt"</scriptWhenChecked>
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3F OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Bingman, C A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bitto, E.]]
+
</jmolCheckbox>
-
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i3f ConSurf].
-
[[Category: Jr., G N.Phillips.]]
+
<div style="clear:both"></div>
-
[[Category: McCoy, J G.]]
+
__TOC__
-
[[Category: Wesenberg, G E.]]
+
</StructureSection>
-
[[Category: Center for eukaryotic structural genomic]]
+
[[Category: Galdieria sulphuraria]]
-
[[Category: Cesg]]
+
[[Category: Large Structures]]
-
[[Category: Gltp superfamily]]
+
[[Category: Bingman CA]]
-
[[Category: Gltp-like]]
+
[[Category: Bitto E]]
-
[[Category: Protein structure initiative]]
+
[[Category: McCoy JG]]
-
[[Category: Psi]]
+
[[Category: Phillips Jr GN]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 07:01:31 2008''
+
[[Category: Wesenberg GE]]

Current revision

Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria

PDB ID 2i3f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools