2il9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:03, 21 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2il9.gif|left|200px]]
 
-
<!--
+
==Crystal Structure of Plautia Stali Intestine Virus Intergenic Region Internal Ribosome Entry Site Ribosomal Binding Domain RNA at 3.1 Angstroms==
-
The line below this paragraph, containing "STRUCTURE_2il9", creates the "Structure Box" on the page.
+
<StructureSection load='2il9' size='340' side='right'caption='[[2il9]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2il9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plautia_stali_intestine_virus Plautia stali intestine virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IL9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IL9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2il9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2il9 OCA], [https://pdbe.org/2il9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2il9 RCSB], [https://www.ebi.ac.uk/pdbsum/2il9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2il9 ProSAT]</span></td></tr>
-
{{STRUCTURE_2il9| PDB=2il9 | SCENE= }}
+
</table>
-
 
+
__TOC__
-
'''Crystal Structure of Plautia Stali Intestine Virus Intergenic Region Internal Ribosome Entry Site Ribosomal Binding Domain RNA at 3.1 Angstroms'''
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
 
+
[[Category: Plautia stali intestine virus]]
-
==Overview==
+
[[Category: Costantino DA]]
-
Canonical cap-dependent translation initiation requires a large number of protein factors that act in a stepwise assembly process. In contrast, internal ribosomal entry sites (IRESs) are cis-acting RNAs that in some cases completely supplant these factors by recruiting and activating the ribosome using a single structured RNA. Here we present the crystal structures of the ribosome-binding domain from a Dicistroviridae intergenic region IRES at 3.1 angstrom resolution, providing a view of the prefolded architecture of an all-RNA translation initiation apparatus. Docking of the structure into cryo-electron microscopy reconstructions of an IRES-ribosome complex suggests a model for ribosome manipulation by a dynamic IRES RNA.
+
[[Category: Kieft JS]]
-
 
+
[[Category: Pfingsten JS]]
-
==About this Structure==
+
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IL9 OCA].
+
-
 
+
-
==Reference==
+
-
Structural basis for ribosome recruitment and manipulation by a viral IRES RNA., Pfingsten JS, Costantino DA, Kieft JS, Science. 2006 Dec 1;314(5804):1450-4. Epub 2006 Nov 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17124290 17124290]
+
-
[[Category: Costantino, D A.]]
+
-
[[Category: Kieft, J S.]]
+
-
[[Category: Pfingsten, J S.]]
+
-
[[Category: Double-nested pseudoknot]]
+
-
[[Category: Ire]]
+
-
[[Category: Psiv]]
+
-
[[Category: Ribosomal binding domain]]
+
-
[[Category: Rna]]
+
-
[[Category: Under wound helix]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 07:37:27 2008''
+

Current revision

Crystal Structure of Plautia Stali Intestine Virus Intergenic Region Internal Ribosome Entry Site Ribosomal Binding Domain RNA at 3.1 Angstroms

PDB ID 2il9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2il9"
Personal tools