2jpi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:10, 20 December 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2jpi.gif|left|200px]]
 
-
<!--
+
==NMR structure of PA4090 from Pseudomonas aeruginosa==
-
The line below this paragraph, containing "STRUCTURE_2jpi", creates the "Structure Box" on the page.
+
<StructureSection load='2jpi' size='340' side='right'caption='[[2jpi]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2jpi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JPI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jpi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jpi OCA], [https://pdbe.org/2jpi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jpi RCSB], [https://www.ebi.ac.uk/pdbsum/2jpi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jpi ProSAT]</span></td></tr>
-
{{STRUCTURE_2jpi| PDB=2jpi | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''chemical shift assignments of PA4090 from Pseudomonas aeruginosa'''
+
[https://www.uniprot.org/uniprot/Q9HWT8_PSEAE Q9HWT8_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2JPI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JPI OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jp/2jpi_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jpi ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Ai X]]
-
[[Category: Ai, X.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Choy W]]
-
[[Category: Choy, W.]]
+
[[Category: Li SSC]]
-
[[Category: Li, S S.C.]]
+
[[Category: Semesi A]]
-
[[Category: OCSP, Ontario Centre for Structural Proteomics.]]
+
[[Category: Yee A]]
-
[[Category: Semesi, A.]]
+
-
[[Category: Yee, A.]]
+
-
[[Category: Alpha-helix/beta-sheet]]
+
-
[[Category: Ocsp]]
+
-
[[Category: Ontario centre for structural proteomic]]
+
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 09:09:10 2008''
+

Current revision

NMR structure of PA4090 from Pseudomonas aeruginosa

PDB ID 2jpi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools