This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2o2z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:47, 25 January 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2o2z.gif|left|200px]]
 
-
<!--
+
==Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution==
-
The line below this paragraph, containing "STRUCTURE_2o2z", creates the "Structure Box" on the page.
+
<StructureSection load='2o2z' size='340' side='right'caption='[[2o2z]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2o2z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans Alkalihalobacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O2Z FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o2z OCA], [https://pdbe.org/2o2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o2z RCSB], [https://www.ebi.ac.uk/pdbsum/2o2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o2z ProSAT], [https://www.topsan.org/Proteins/JCSG/2o2z TOPSAN]</span></td></tr>
-
{{STRUCTURE_2o2z| PDB=2o2z | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Crystal structure of a protein of unknown function from UPF0052 family (NP_244435.1) from Bacillus halodurans at 2.60 A resolution'''
+
[https://www.uniprot.org/uniprot/GNGF_HALH5 GNGF_HALH5] Required for morphogenesis under gluconeogenic growth conditions.[HAMAP-Rule:MF_00973]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2O2Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O2Z OCA].
+
<jmolCheckbox>
-
[[Category: Bacillus halodurans]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o2/2o2z_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Hypothetical protein]]
+
</jmolCheckbox>
-
[[Category: Jcsg]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o2z ConSurf].
-
[[Category: Joint center for structural genomic]]
+
<div style="clear:both"></div>
-
[[Category: Np_244435 1]]
+
__TOC__
-
[[Category: Protein structure initiative]]
+
</StructureSection>
-
[[Category: Psi-2]]
+
[[Category: Alkalihalobacillus halodurans]]
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 10:15:30 2008''
+

Current revision

Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution

PDB ID 2o2z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2o2z"
Personal tools