This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2o62

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:14, 28 December 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2o62.gif|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3598 FAMILY (NPUN_R4044) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.75 A RESOLUTION==
-
The line below this paragraph, containing "STRUCTURE_2o62", creates the "Structure Box" on the page.
+
<StructureSection load='2o62' size='340' side='right'caption='[[2o62]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2o62]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_punctiforme_PCC_73102 Nostoc punctiforme PCC 73102]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O62 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O62 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2o62| PDB=2o62 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o62 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o62 OCA], [https://pdbe.org/2o62 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o62 RCSB], [https://www.ebi.ac.uk/pdbsum/2o62 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o62 ProSAT], [https://www.topsan.org/Proteins/JCSG/2o62 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of a putative lipocalin (ZP_00105914.2) from Nostoc punctiforme PCC 73102 at 1.75 A resolution'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/B2J6L8_NOSP7 B2J6L8_NOSP7]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O62 OCA].
+
Check<jmol>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<jmolCheckbox>
-
[[Category: Hypothetical protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o6/2o62_consurf.spt"</scriptWhenChecked>
-
[[Category: Jcsg]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Joint center for structural genomic]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Protein structure initiative]]
+
</jmolCheckbox>
-
[[Category: Psi-2]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o62 ConSurf].
-
[[Category: Structural genomic]]
+
<div style="clear:both"></div>
-
[[Category: Zp_00105914 2]]
+
__TOC__
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 10:22:26 2008''
+
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Nostoc punctiforme PCC 73102]]

Current revision

CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3598 FAMILY (NPUN_R4044) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.75 A RESOLUTION

PDB ID 2o62

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools