2okm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:19, 28 December 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2okm.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of ACE19, the collagen binding subdomain of Enterococcus faecalis surface protein ACE==
-
The line below this paragraph, containing "STRUCTURE_2okm", creates the "Structure Box" on the page.
+
<StructureSection load='2okm' size='340' side='right'caption='[[2okm]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2okm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OKM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_2okm| PDB=2okm | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2okm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2okm OCA], [https://pdbe.org/2okm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2okm RCSB], [https://www.ebi.ac.uk/pdbsum/2okm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2okm ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9F865_ENTFL Q9F865_ENTFL]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ok/2okm_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2okm ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of ACE19, the collagen binding subdomain of Enterococcus faecalis surface protein ACE'''
+
==See Also==
-
 
+
*[[Adhesin 3D structures|Adhesin 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2OKM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKM OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structure of ACE19, the collagen binding subdomain of Enterococus faecalis surface protein ACE., Ponnuraj K, Narayana SV, Proteins. 2007 Oct 1;69(1):199-203. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17557326 17557326]
+
[[Category: Enterococcus faecalis]]
[[Category: Enterococcus faecalis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Narayana, S V.L.]]
+
[[Category: Narayana SVL]]
-
[[Category: Ponnuraj, K.]]
+
[[Category: Ponnuraj K]]
-
[[Category: Adhesin]]
+
-
[[Category: Cell adhesion]]
+
-
[[Category: Collagen-binding]]
+
-
[[Category: Crystal structure]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 11:06:34 2008''
+

Current revision

Crystal structure of ACE19, the collagen binding subdomain of Enterococcus faecalis surface protein ACE

PDB ID 2okm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2okm"
Personal tools