This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2op5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:21, 28 December 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2op5.gif|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF A DIMERIC FERREDOXIN-LIKE PROTEIN (JCVI_PEP_1096672785533) FROM UNCULTURED MARINE ORGANISM AT 2.20 A RESOLUTION==
-
The line below this paragraph, containing "STRUCTURE_2op5", creates the "Structure Box" on the page.
+
<StructureSection load='2op5' size='340' side='right'caption='[[2op5]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2op5]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_marine_organism Uncultured marine organism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OP5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OP5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2op5| PDB=2op5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2op5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2op5 OCA], [https://pdbe.org/2op5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2op5 RCSB], [https://www.ebi.ac.uk/pdbsum/2op5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2op5 ProSAT], [https://www.topsan.org/Proteins/JCSG/2op5 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of a dimeric ferredoxin-like protein (JCVI_PEP_1096672785533) from an environmental metagenome (unidentified marine microbe), Sorcerer II Global Ocean Sampling experiment at 2.20 A resolution'''
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
==About this Structure==
+
[[Category: Uncultured marine organism]]
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OP5 OCA].
+
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
-
[[Category: Hypothetical protein]]
+
-
[[Category: Jcsg]]
+
-
[[Category: Jcvi_pep_1096672785533]]
+
-
[[Category: Joint center for structural genomic]]
+
-
[[Category: Metagenomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 11:22:06 2008''
+

Current revision

CRYSTAL STRUCTURE OF A DIMERIC FERREDOXIN-LIKE PROTEIN (JCVI_PEP_1096672785533) FROM UNCULTURED MARINE ORGANISM AT 2.20 A RESOLUTION

PDB ID 2op5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools