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2otm

From Proteopedia

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[[Image:2otm.gif|left|200px]]
 
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==Crystal structure of a putative endoribonuclease (so_1960) from shewanella oneidensis mr-1 at 1.85 A resolution==
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The line below this paragraph, containing "STRUCTURE_2otm", creates the "Structure Box" on the page.
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<StructureSection load='2otm' size='340' side='right'caption='[[2otm]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2otm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis_MR-1 Shewanella oneidensis MR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OTM FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2otm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2otm OCA], [https://pdbe.org/2otm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2otm RCSB], [https://www.ebi.ac.uk/pdbsum/2otm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2otm ProSAT], [https://www.topsan.org/Proteins/JCSG/2otm TOPSAN]</span></td></tr>
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{{STRUCTURE_2otm| PDB=2otm | SCENE= }}
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</table>
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== Function ==
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'''Crystal structure of a putative endoribonuclease from Shewanella oneidensis at 1.85 A resolution'''
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[https://www.uniprot.org/uniprot/Q8EFL1_SHEON Q8EFL1_SHEON]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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2OTM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_oneidensis Shewanella oneidensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTM OCA].
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<jmolCheckbox>
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[[Category: Shewanella oneidensis]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/2otm_consurf.spt"</scriptWhenChecked>
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[[Category: Single protein]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Hypothetical protein]]
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</jmolCheckbox>
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[[Category: Jcsg]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2otm ConSurf].
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[[Category: Joint center for structural genomic]]
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<div style="clear:both"></div>
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[[Category: Np_717567 1]]
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__TOC__
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[[Category: Protein structure initiative]]
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</StructureSection>
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[[Category: Psi-2]]
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[[Category: Large Structures]]
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[[Category: Structural genomic]]
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[[Category: Shewanella oneidensis MR-1]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 11:37:55 2008''
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Current revision

Crystal structure of a putative endoribonuclease (so_1960) from shewanella oneidensis mr-1 at 1.85 A resolution

PDB ID 2otm

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