This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ozv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:10, 9 June 2021) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ozv.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a predicted O-methyltransferase, protein Atu636 from Agrobacterium tumefaciens.==
-
The line below this paragraph, containing "STRUCTURE_2ozv", creates the "Structure Box" on the page.
+
<StructureSection load='2ozv' size='340' side='right'caption='[[2ozv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ozv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OZV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Atu0636 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
-
{{STRUCTURE_2ozv| PDB=2ozv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ozv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ozv OCA], [https://pdbe.org/2ozv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ozv RCSB], [https://www.ebi.ac.uk/pdbsum/2ozv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ozv ProSAT], [https://www.topsan.org/Proteins/MCSG/2ozv TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of a predicted O-methyltransferase, protein Atu636 from Agrobacterium tumefaciens.'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2OZV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZV OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oz/2ozv_consurf.spt"</scriptWhenChecked>
-
[[Category: Agrobacterium tumefaciens]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cuff, M E.]]
+
</jmolCheckbox>
-
[[Category: Edwards, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ozv ConSurf].
-
[[Category: Joachimiak, A.]]
+
<div style="clear:both"></div>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
__TOC__
-
[[Category: Savchenko, A.]]
+
</StructureSection>
-
[[Category: Xu, X.]]
+
[[Category: Agrfc]]
-
[[Category: Zheng, X.]]
+
[[Category: Large Structures]]
 +
[[Category: Cuff, M E]]
 +
[[Category: Edwards, A]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Xu, X]]
 +
[[Category: Zheng, X]]
[[Category: Agrobacterium tumefacien]]
[[Category: Agrobacterium tumefacien]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
 
[[Category: Pfam pf05175]]
[[Category: Pfam pf05175]]
[[Category: Predicted o-methyltransferase]]
[[Category: Predicted o-methyltransferase]]
[[Category: Predicted transferase]]
[[Category: Predicted transferase]]
-
[[Category: Protein structure initiative]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Psi-2]]
+
[[Category: Transferase]]
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 12:01:24 2008''
+

Current revision

Crystal structure of a predicted O-methyltransferase, protein Atu636 from Agrobacterium tumefaciens.

PDB ID 2ozv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ozv"
Personal tools