2p9m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:27, 30 October 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p9m.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661==
-
The line below this paragraph, containing "STRUCTURE_2p9m", creates the "Structure Box" on the page.
+
<StructureSection load='2p9m' size='340' side='right'caption='[[2p9m]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2p9m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9M FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2p9m| PDB=2p9m | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9m OCA], [https://pdbe.org/2p9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9m RCSB], [https://www.ebi.ac.uk/pdbsum/2p9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9m ProSAT], [https://www.topsan.org/Proteins/RSGI/2p9m TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y922_METJA Y922_METJA]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2P9M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_dsm_2661 Methanocaldococcus jannaschii dsm 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA].
+
Check<jmol>
-
[[Category: Methanocaldococcus jannaschii dsm 2661]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9m_consurf.spt"</scriptWhenChecked>
-
[[Category: Charz, J.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Chen, L.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Ebihara, A.]]
+
</jmolCheckbox>
-
[[Category: Fu, Z-Q.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p9m ConSurf].
-
[[Category: II, J T.Swindell.]]
+
<div style="clear:both"></div>
-
[[Category: Kuramitsu, S.]]
+
__TOC__
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
</StructureSection>
-
[[Category: Rose, J P.]]
+
[[Category: Large Structures]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: Shinkai, A.]]
+
[[Category: Charz J]]
-
[[Category: Wang, B-C.]]
+
[[Category: Chen L]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Ebihara A]]
-
[[Category: Zhao, M.]]
+
[[Category: Fu Z-Q]]
-
[[Category: Zhu, J.]]
+
[[Category: Kuramitsu S]]
-
[[Category: Methanocaldococcus jannaschii]]
+
[[Category: Rose JP]]
-
[[Category: Mj0922]]
+
[[Category: Shinkai A]]
-
[[Category: Protein structure initiative]]
+
[[Category: Swindell II JT]]
-
[[Category: Psi]]
+
[[Category: Wang B-C]]
-
[[Category: Riken structural genomics/proteomics initiative]]
+
[[Category: Yokoyama S]]
-
[[Category: Rsgi]]
+
[[Category: Zhao M]]
-
[[Category: Secsg]]
+
[[Category: Zhu J]]
-
[[Category: Southeast collaboratory for structural genomic]]
+
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 12:40:25 2008''
+

Current revision

Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661

PDB ID 2p9m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2p9m"
Personal tools