This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1hq4
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="1hq4" size="450" color="white" frame="true" align="right" spinBox="true" caption="1hq4, resolution 2.7Å" /> '''STRUCTURE OF NATIVE ...) |
|||
| (16 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1hq4.gif|left|200px]]<br /> | ||
| - | <applet load="1hq4" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1hq4, resolution 2.7Å" /> | ||
| - | '''STRUCTURE OF NATIVE CATALYTIC ANTIBODY HA5-19A4'''<br /> | ||
| - | == | + | ==STRUCTURE OF NATIVE CATALYTIC ANTIBODY HA5-19A4== |
| - | + | <StructureSection load='1hq4' size='340' side='right'caption='[[1hq4]], [[Resolution|resolution]] 2.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[1hq4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HQ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HQ4 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hq4 OCA], [https://pdbe.org/1hq4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hq4 RCSB], [https://www.ebi.ac.uk/pdbsum/1hq4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hq4 ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/A0A5E3_MOUSE A0A5E3_MOUSE] |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/1hq4_consurf.spt"</scriptWhenChecked> |
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hq4 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Mus musculus]] | ||
| + | [[Category: Christianson DW]] | ||
| + | [[Category: Hasserodt J]] | ||
| + | [[Category: Janda KD]] | ||
| + | [[Category: Lerner RA]] | ||
| + | [[Category: Paschall CM]] | ||
Current revision
STRUCTURE OF NATIVE CATALYTIC ANTIBODY HA5-19A4
| |||||||||||
