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2pkw

From Proteopedia

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[[Image:2pkw.jpg|left|200px]]
 
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==Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221==
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The line below this paragraph, containing "STRUCTURE_2pkw", creates the "Structure Box" on the page.
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<StructureSection load='2pkw' size='340' side='right'caption='[[2pkw]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pkw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PKW FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2pkw| PDB=2pkw | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yhiQ, STM3593 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pkw OCA], [https://pdbe.org/2pkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pkw RCSB], [https://www.ebi.ac.uk/pdbsum/2pkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pkw ProSAT], [https://www.topsan.org/Proteins/NESGC/2pkw TOPSAN]</span></td></tr>
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'''Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221'''
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</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/RSMJ_SALTY RSMJ_SALTY]] Specifically methylates the guanosine in position 1516 of 16S rRNA.[HAMAP-Rule:MF_01523]
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==About this Structure==
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== Evolutionary Conservation ==
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2PKW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKW OCA].
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Salmonella typhimurium]]
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Check<jmol>
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[[Category: Single protein]]
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<jmolCheckbox>
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[[Category: Acton, T B.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pkw_consurf.spt"</scriptWhenChecked>
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[[Category: Cunningham, K.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Fang, Y.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Forouhar, F.]]
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</jmolCheckbox>
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[[Category: Hunt, J F.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pkw ConSurf].
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[[Category: Liu, J.]]
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<div style="clear:both"></div>
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[[Category: Ma, L-C.]]
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__TOC__
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[[Category: Montelione, G T.]]
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</StructureSection>
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Large Structures]]
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[[Category: Owens, L.]]
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[[Category: Salty]]
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[[Category: Seetharaman, J.]]
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[[Category: Acton, T B]]
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[[Category: Su, M.]]
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[[Category: Cunningham, K]]
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[[Category: Tong, L.]]
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[[Category: Fang, Y]]
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[[Category: Xiao, R.]]
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[[Category: Forouhar, F]]
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[[Category: Hunt, J F]]
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[[Category: Liu, J]]
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[[Category: Ma, L C]]
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[[Category: Montelione, G T]]
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[[Category: Structural genomic]]
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[[Category: Owens, L]]
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[[Category: Seetharaman, J]]
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[[Category: Su, M]]
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[[Category: Tong, L]]
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[[Category: Xiao, R]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Unknown function]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 13:19:25 2008''
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Current revision

Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221

PDB ID 2pkw

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OCA

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