Template:STRUCTURE 2qc8
From Proteopedia
(Difference between revisions)
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2qc8, resolution 2.60Å (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=ADP...) |
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{{Structure | {{Structure | ||
- | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2qc8, resolution 2.60Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2qc8]], [[Resolution|resolution]] 2.60Å (<scene name='initialview01'>default scene</scene>)}}} |
- | + | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=P3S:L-METHIONINE-S-SULFOXIMINE+PHOSPHATE'>P3S</scene> | |
- | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5 | + | |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate--ammonia_ligase Glutamate--ammonia ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.1.2 6.3.1.2] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate--ammonia_ligase Glutamate--ammonia ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.1.2 6.3.1.2] </span> | ||
|GENE= GLUL, GLNS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= GLUL, GLNS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
- | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03951 Gln-synt_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00120 Gln-synt_C]</span> | ||
|RELATEDENTRY=[[2ojw|2ojw]] | |RELATEDENTRY=[[2ojw|2ojw]] | ||
- | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qc8 OCA], [http://www.ebi.ac.uk/pdbsum/2qc8 PDBsum], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qc8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qc8 RCSB], [http://www.ebi.ac.uk/pdbsum/2qc8 PDBsum]</span> |
+ | |FUNCTION={{GO|id=GO:0016874 | text = ligase activity}}{{GO|id=GO:0004356 | text = glutamate-ammonia ligase activity}}{{GO|id=GO:0003824 | text = catalytic activity}} | ||
+ | |PROCESS={{GO|id=GO:0006807 | text = nitrogen compound metabolic process}}{{GO|id=GO:0006542 | text = glutamine biosynthetic process}}{{GO|id=GO:0001505 | text = regulation of neurotransmitter levels}} | ||
+ | |COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | ||
+ | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014746 Ipr014746], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008147 Ipr008147], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008146 Ipr008146]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00120 PF00120], [http://pfam.sanger.ac.uk/family?acc=PF03951 PF03951]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P15104 P15104]</span> | ||
+ | |uPDB=2QC8|CONSURF={{!}}- | ||
+ | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
+ | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
+ | {{!}} '''Toggle Conservation Colors:''' | ||
+ | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
+ | Rows = identical sequences: | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>A [x]</text> | ||
+ | <name>jmb_2qc8_A</name> | ||
+ | <title>toggle chain A</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>B [x]</text> | ||
+ | <name>jmb_2qc8_B</name> | ||
+ | <title>toggle chain B</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>C [x]</text> | ||
+ | <name>jmb_2qc8_C</name> | ||
+ | <title>toggle chain C</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>D [x]</text> | ||
+ | <name>jmb_2qc8_D</name> | ||
+ | <title>toggle chain D</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>E [x]</text> | ||
+ | <name>jmb_2qc8_E</name> | ||
+ | <title>toggle chain E</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>F [x]</text> | ||
+ | <name>jmb_2qc8_F</name> | ||
+ | <title>toggle chain F</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>G [x]</text> | ||
+ | <name>jmb_2qc8_G</name> | ||
+ | <title>toggle chain G</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>H [x]</text> | ||
+ | <name>jmb_2qc8_H</name> | ||
+ | <title>toggle chain H</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>I [x]</text> | ||
+ | <name>jmb_2qc8_I</name> | ||
+ | <title>toggle chain I</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>J [x]</text> | ||
+ | <name>jmb_2qc8_J</name> | ||
+ | <title>toggle chain J</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
}} | }} |
Current revision
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2qc8, resolution 2.60Å () | |||||||||
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Ligands: | , , , | ||||||||
Gene: | GLUL, GLNS (Homo sapiens) | ||||||||
Activity: | Glutamate--ammonia ligase, with EC number 6.3.1.2 | ||||||||
Related: | 2ojw | ||||||||
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Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
Coordinates: | save as pdb, mmCIF, xml |