2qf8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:21, 21 November 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qf8.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the complex of Buffalo Secretory Glycoprotein with tetrasaccharide at 2.8A resolution==
-
The line below this paragraph, containing "STRUCTURE_2qf8", creates the "Structure Box" on the page.
+
<StructureSection load='2qf8' size='340' side='right'caption='[[2qf8]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qf8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QF8 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
{{STRUCTURE_2qf8| PDB=2qf8 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qf8 OCA], [https://pdbe.org/2qf8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qf8 RCSB], [https://www.ebi.ac.uk/pdbsum/2qf8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qf8 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CH3L1_BUBBU CH3L1_BUBBU] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qf/2qf8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qf8 ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of the complex of Buffalo Secretory Glycoprotein with tetrasaccharide at 2.8A resolution'''
+
==See Also==
-
 
+
*[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2QF8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QF8 OCA].
+
[[Category: Bubalus bubalis]]
[[Category: Bubalus bubalis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Jain,R.]]
+
[[Category: Jain R]]
-
[[Category: Kaur,P.]]
+
[[Category: Kaur P]]
-
[[Category: Kumar,A.]]
+
[[Category: Kumar A]]
-
[[Category: Sharma,S.]]
+
[[Category: Sharma S]]
-
[[Category: Singh,A K.]]
+
[[Category: Singh AK]]
-
[[Category: Singh,N.]]
+
[[Category: Singh N]]
-
[[Category: Singh,T P.]]
+
[[Category: Singh TP]]
-
[[Category: Sinha,M.]]
+
[[Category: Sinha M]]
-
[[Category: Buffalo]]
+
-
[[Category: Complex]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Secretory]]
+
-
[[Category: Tetrasaccharide]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 14:51:13 2008''
+

Current revision

Crystal structure of the complex of Buffalo Secretory Glycoprotein with tetrasaccharide at 2.8A resolution

PDB ID 2qf8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qf8"
Personal tools