This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 2v89

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "Template:STRUCTURE 2v89" [edit=sysop:move=sysop])
Current revision (08:58, 13 March 2013) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2v89, resolution 1.1&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2v89]], [[Resolution|resolution]] 1.10&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE= <scene name='pdbsite=AC1:Zn+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:Zn+Binding+Site+For+Chain+B'>AC3</scene> and <scene name='pdbsite=AC4:Zn+Binding+Site+For+Chain+B'>AC4</scene>
+
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
-
|LIGAND= <scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
-
|ACTIVITY=
+
-
|GENE=
+
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03089 RAG2]</span>
+
|RELATEDENTRY=[[2v86|2v86]], [[2v87|2v87]], [[2a23|2a23]], [[2v83|2v83]], [[2v85|2v85]], [[2v88|2v88]]
|RELATEDENTRY=[[2v86|2v86]], [[2v87|2v87]], [[2a23|2a23]], [[2v83|2v83]], [[2v85|2v85]], [[2v88|2v88]]
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v89 OCA], [http://www.ebi.ac.uk/pdbsum/2v89 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v89 RCSB]</span>
+
|NONSTDRES=<scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v89 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2v89 RCSB], [http://www.ebi.ac.uk/pdbsum/2v89 PDBsum]</span>
 +
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR025162 Ipr025162], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011043 Ipr011043], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015915 Ipr015915], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004321 Ipr004321]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03089 PF03089]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=152778 d2v89a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=152779 d2v89b1]</span>
 +
|uPDB=2V89|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_2v89_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_2v89_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>C [x]</text>
 +
<name>jmb_2v89_C</name>
 +
<title>toggle chain C</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>D [x]</text>
 +
<name>jmb_2v89_D</name>
 +
<title>toggle chain D</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
2v89, resolution 1.10Å ()
Ligands:
Non-Standard Residues:
Related: 2v86, 2v87, 2a23, 2v83, 2v85, 2v88
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_2v89"
Personal tools