2yqu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:07, 23 October 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2yqu.jpg|left|200px]]
 
-
<!--
+
==Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilus==
-
The line below this paragraph, containing "STRUCTURE_2yqu", creates the "Structure Box" on the page.
+
<StructureSection load='2yqu' size='340' side='right'caption='[[2yqu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2yqu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YQU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_2yqu| PDB=2yqu | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yqu OCA], [https://pdbe.org/2yqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yqu RCSB], [https://www.ebi.ac.uk/pdbsum/2yqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yqu ProSAT], [https://www.topsan.org/Proteins/RSGI/2yqu TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5SLK6_THET8 Q5SLK6_THET8]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/2yqu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yqu ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilus'''
+
==See Also==
-
 
+
*[[Dihydrolipoamide dehydrogenase|Dihydrolipoamide dehydrogenase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2YQU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YQU OCA].
+
[[Category: Large Structures]]
-
[[Category: Dihydrolipoyl dehydrogenase]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Single protein]]
+
[[Category: Adachi W]]
-
[[Category: Thermus thermophilus]]
+
[[Category: Hossain MT]]
-
[[Category: Adachi, W.]]
+
[[Category: Kamiya N]]
-
[[Category: Hossain, M T.]]
+
[[Category: Kondo H]]
-
[[Category: Kamiya, N.]]
+
[[Category: Kuramitsu K]]
-
[[Category: Kondo, H.]]
+
[[Category: Nakai T]]
-
[[Category: Kuramitsu, K.]]
+
-
[[Category: Nakai, T.]]
+
-
[[Category: 2-oxoglutarate dehydrogenase complex]]
+
-
[[Category: Lipoamide dehydrogenase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Pyruvate dehydrogenase complex]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 19:13:37 2008''
+

Current revision

Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilus

PDB ID 2yqu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools