2yzy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:55, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2yzy.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8==
-
The line below this paragraph, containing "STRUCTURE_2yzy", creates the "Structure Box" on the page.
+
<StructureSection load='2yzy' size='340' side='right'caption='[[2yzy]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2yzy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZY FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-
{{STRUCTURE_2yzy| PDB=2yzy | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzy OCA], [https://pdbe.org/2yzy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzy RCSB], [https://www.ebi.ac.uk/pdbsum/2yzy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzy ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzy TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5SJJ6_THET8 Q5SJJ6_THET8]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2YZY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZY OCA].
+
Check<jmol>
-
[[Category: Single protein]]
+
<jmolCheckbox>
-
[[Category: Thermus thermophilus]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzy_consurf.spt"</scriptWhenChecked>
-
[[Category: Ebihara, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Kuramitsu, S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
</jmolCheckbox>
-
[[Category: Watanabe, N.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzy ConSurf].
-
[[Category: Yokoyama, S.]]
+
<div style="clear:both"></div>
-
[[Category: National project on protein structural and functional analyse]]
+
__TOC__
-
[[Category: Nppsfa]]
+
</StructureSection>
-
[[Category: Riken structural genomics/proteomics initiative]]
+
[[Category: Large Structures]]
-
[[Category: Rsgi]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Structural genomic]]
+
[[Category: Ebihara A]]
-
[[Category: Uncharacterized conserved protein]]
+
[[Category: Kuramitsu S]]
-
[[Category: Unknown function]]
+
[[Category: Watanabe N]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 19:45:25 2008''
+
[[Category: Yokoyama S]]

Current revision

Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8

PDB ID 2yzy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools