2z04

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:40, 30 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2z04.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus==
-
The line below this paragraph, containing "STRUCTURE_2z04", creates the "Structure Box" on the page.
+
<StructureSection load='2z04' size='340' side='right'caption='[[2z04]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2z04]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z04 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z04 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_2z04| PDB=2z04 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z04 OCA], [https://pdbe.org/2z04 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z04 RCSB], [https://www.ebi.ac.uk/pdbsum/2z04 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z04 ProSAT], [https://www.topsan.org/Proteins/RSGI/2z04 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PURK_AQUAE PURK_AQUAE] Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z0/2z04_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z04 ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus'''
+
==See Also==
-
 
+
*[[Phosphoribosylaminoimidazole carboxylase 3D structures|Phosphoribosylaminoimidazole carboxylase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2Z04 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z04 OCA].
+
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
-
[[Category: Phosphoribosylaminoimidazole carboxylase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Baba S]]
-
[[Category: Baba, S.]]
+
[[Category: Kanagawa M]]
-
[[Category: Kanagawa, M.]]
+
[[Category: Kawai G]]
-
[[Category: Kawai, G.]]
+
[[Category: Okada K]]
-
[[Category: Okada, K.]]
+
[[Category: Sampei G]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Tamura S]]
-
[[Category: Sampei, G.]]
+
-
[[Category: Tamura, S.]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Decarboxylase]]
+
-
[[Category: Lyase]]
+
-
[[Category: Metabolic system]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Purine biosynthesis]]
+
-
[[Category: Purine nucleotide biosynthetic pathway]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 19:45:50 2008''
+

Current revision

Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus

PDB ID 2z04

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools