3bf2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:48, 30 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bf2.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the A1KSW9_NEIMF protein from Neisseria meningitidis. Northeast Structural Genomics Consortium target MR36a==
-
The line below this paragraph, containing "STRUCTURE_3bf2", creates the "Structure Box" on the page.
+
<StructureSection load='3bf2' size='340' side='right'caption='[[3bf2]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3bf2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_FAM18 Neisseria meningitidis FAM18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BF2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BF2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3bf2| PDB=3bf2 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bf2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bf2 OCA], [https://pdbe.org/3bf2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bf2 RCSB], [https://www.ebi.ac.uk/pdbsum/3bf2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bf2 ProSAT], [https://www.topsan.org/Proteins/NESGC/3bf2 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of the A1KSW9_NEIMF protein from Neisseria meningitidis. Northeast Structural Genomics Consortium target MR36a'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A1KSW9_NEIMF A1KSW9_NEIMF] Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (By similarity).[HAMAP-Rule:MF_01186]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3BF2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_fam18 Neisseria meningitidis fam18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BF2 OCA].
+
Check<jmol>
-
[[Category: Neisseria meningitidis fam18]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bf/3bf2_consurf.spt"</scriptWhenChecked>
-
[[Category: Abashidze, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Acton, T B.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cunningham, K.]]
+
</jmolCheckbox>
-
[[Category: Fang, Y.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bf2 ConSurf].
-
[[Category: Hunt, J F.]]
+
<div style="clear:both"></div>
-
[[Category: Maglaqui, M.]]
+
__TOC__
-
[[Category: Montelione, G T.]]
+
</StructureSection>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: Owens, L.]]
+
[[Category: Neisseria meningitidis FAM18]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Abashidze M]]
-
[[Category: Tong, L.]]
+
[[Category: Acton TB]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Cunningham K]]
-
[[Category: Xiao, R.]]
+
[[Category: Fang Y]]
-
[[Category: Lipoprotein]]
+
[[Category: Hunt JF]]
-
[[Category: Mr36a]]
+
[[Category: Maglaqui M]]
-
[[Category: Nesg]]
+
[[Category: Montelione GT]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Owens L]]
-
[[Category: Protein structure initiative]]
+
[[Category: Seetharaman J]]
-
[[Category: Psi-2]]
+
[[Category: Tong L]]
-
[[Category: Structural genomic]]
+
[[Category: Vorobiev SM]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 20:42:23 2008''
+
[[Category: Xiao R]]

Current revision

Crystal structure of the A1KSW9_NEIMF protein from Neisseria meningitidis. Northeast Structural Genomics Consortium target MR36a

PDB ID 3bf2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bf2"
Personal tools