This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.




3bjs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bjs.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a member of enolase superfamily from Polaromonas sp. JS666==
-
The line below this paragraph, containing "STRUCTURE_3bjs", creates the "Structure Box" on the page.
+
<StructureSection load='3bjs' size='340' side='right'caption='[[3bjs]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3bjs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Polaromonas_sp._JS666 Polaromonas sp. JS666]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BJS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3bjs| PDB=3bjs | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bjs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bjs OCA], [https://pdbe.org/3bjs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bjs RCSB], [https://www.ebi.ac.uk/pdbsum/3bjs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bjs ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bjs TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q120Q7_POLSJ Q120Q7_POLSJ]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/3bjs_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bjs ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of a member of enolase superfamily from Polaromonas sp. JS666'''
+
==See Also==
-
 
+
*[[Enolase 3D structures|Enolase 3D structures]]
-
 
+
*[[Mandelate racemase|Mandelate racemase]]
-
==About this Structure==
+
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
-
3BJS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Polaromonas_sp._js666 Polaromonas sp. js666]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJS OCA].
+
__TOC__
-
[[Category: Polaromonas sp. js666]]
+
</StructureSection>
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S C.]]
+
[[Category: Polaromonas sp. JS666]]
-
[[Category: Bonanno, J B.]]
+
[[Category: Almo SC]]
-
[[Category: Burley, S K.]]
+
[[Category: Bonanno JB]]
-
[[Category: Dickey, M.]]
+
[[Category: Burley SK]]
-
[[Category: Gerlt, J.]]
+
[[Category: Dickey M]]
-
[[Category: Gheyi, T.]]
+
[[Category: Gerlt J]]
-
[[Category: Groshong, C.]]
+
[[Category: Gheyi T]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Groshong C]]
-
[[Category: Ozyurt, S.]]
+
[[Category: Ozyurt S]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Patskovsky Y]]
-
[[Category: Reyes, C.]]
+
[[Category: Reyes C]]
-
[[Category: Sauder, J M.]]
+
[[Category: Sauder JM]]
-
[[Category: Smith, D.]]
+
[[Category: Smith D]]
-
[[Category: Wasserman, S R.]]
+
[[Category: Wasserman SR]]
-
[[Category: Enolase]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Plasmid]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Racemase]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 20:51:34 2008''
+

Current revision

Crystal structure of a member of enolase superfamily from Polaromonas sp. JS666

PDB ID 3bjs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools