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1aqt

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(New page: 200px<br /><applet load="1aqt" size="450" color="white" frame="true" align="right" spinBox="true" caption="1aqt, resolution 2.3&Aring;" /> '''EPSILON SUBUNIT OF F1...)
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[[Image:1aqt.gif|left|200px]]<br /><applet load="1aqt" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1aqt, resolution 2.3&Aring;" />
 
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'''EPSILON SUBUNIT OF F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI'''<br />
 
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==Overview==
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==EPSILON SUBUNIT OF F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI==
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BACKGROUND: Proton-translocating ATP synthases convert the energy, generated from photosynthesis or respiration into ATP. These enzymes, termed F0F1-ATPases, are structurally highly conserved. In Escherichia, coli, F0F1-ATPase consists of a membrane portion, F0, made up of three, different polypeptides (a, b and c) and an F1 portion comprising five, different polypeptides in the stoichiometry alpha 3 beta 3 gamma delta, epsilon. The minor subunits gamma, delta and epsilon are required for the, coupling of proton translocation with ATP synthesis; the epsilon subunit, is in close contact with the alpha, beta, gamma and c subunits. The, structure of the epsilon subunit provides clues to its essential role in, this complex enzyme. RESULTS: The structure of the E. coli F0F1-ATPase, epsilon subunit has been solved at 2.3 A resolution by multiple, isomorphous replacement. The structure, comprising residues 2-136 of the, polypeptide chain and 14 water molecules, refined to an R value of 0.214, (Rfree = 0.288). The molecule has a novel fold with two domains. The, N-terminal domain is a beta sandwich with two five-stranded sheets. The, C-terminal domain is formed from two alpha helices arranged in an, antiparallel coiled-coil. A series of alanine residues from each helix, form the central contacting residues in the helical domain and can be, described as an 'alanine zipper'. There is an extensive hydrophobic, contact region between the two domains providing a stable interface. The, individual domains of the crystal structure closely resemble the, structures determined in solution by NMR spectroscopy. CONCLUSIONS:, Sequence alignments of a number of epsilon subunits from diverse sources, suggest that the C-terminal domain, which is absent in some species, is, not essential for function. In the crystal the N-terminal domains of two, epsilon subunits make a close hydrophobic interaction across a, crystallographic twofold axis. This region has previously been proposed as, the contact surface between the epsilon and gamma subunits in the complete, F1-ATPase complex. In the crystal structure we observe what is apparently, a stable interface between the two domains of the epsilon subunit, consistent with the fact that the crystal and solution structures are, quite similar despite close crystal packing. This suggests that a gross, conformational change in the epsilon subunit, to transmit the effect of, proton translocation to the catalytic domain, is unlikely, but cannot be, ruled out.
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<StructureSection load='1aqt' size='340' side='right'caption='[[1aqt]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1aqt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AQT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AQT FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1aqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aqt OCA], [https://pdbe.org/1aqt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1aqt RCSB], [https://www.ebi.ac.uk/pdbsum/1aqt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aqt ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ATPE_ECOLI ATPE_ECOLI] Produces ATP from ADP in the presence of a proton gradient across the membrane.[HAMAP-Rule:MF_00530]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/1aqt_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aqt ConSurf].
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<div style="clear:both"></div>
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==About this Structure==
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==See Also==
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1AQT is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Active as [http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1AQT OCA].
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*[[ATPase 3D structures|ATPase 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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Crystal structure of the epsilon subunit of the proton-translocating ATP synthase from Escherichia coli., Uhlin U, Cox GB, Guss JM, Structure. 1997 Sep 15;5(9):1219-30. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9331422 9331422]
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[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: H(+)-transporting two-sector ATPase]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Guss JM]]
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[[Category: Guss, J.M.]]
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[[Category: Uhlin U]]
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[[Category: Uhlin, U.]]
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[[Category: atp synthase]]
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[[Category: atpase]]
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[[Category: epsilon subunit]]
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[[Category: hydrolase]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 11:03:25 2007''
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Current revision

EPSILON SUBUNIT OF F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI

PDB ID 1aqt

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