3c7j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:52, 30 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3c7j.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of transcriptional regulator (GntR family member) from Pseudomonas syringae pv. tomato str. DC3000==
-
The line below this paragraph, containing "STRUCTURE_3c7j", creates the "Structure Box" on the page.
+
<StructureSection load='3c7j' size='340' side='right'caption='[[3c7j]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3c7j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._DC3000 Pseudomonas syringae pv. tomato str. DC3000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C7J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C7J FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
{{STRUCTURE_3c7j| PDB=3c7j | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c7j OCA], [https://pdbe.org/3c7j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c7j RCSB], [https://www.ebi.ac.uk/pdbsum/3c7j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c7j ProSAT], [https://www.topsan.org/Proteins/MCSG/3c7j TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q19AK4_PSESY Q19AK4_PSESY]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c7/3c7j_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c7j ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of transcriptional regulator (GntR family member) from Pseudomonas syringae pv. tomato str. DC3000'''
+
==See Also==
-
 
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3C7J is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._dc3000 Pseudomonas syringae pv. tomato str. dc3000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C7J OCA].
+
[[Category: Large Structures]]
-
[[Category: Pseudomonas syringae pv. tomato str. dc3000]]
+
[[Category: Pseudomonas syringae pv. tomato str. DC3000]]
-
[[Category: Single protein]]
+
[[Category: Gu M]]
-
[[Category: Gu, M.]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Nocek B]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Sather A]]
-
[[Category: Nocek, B.]]
+
-
[[Category: Sather, A.]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Gntr family]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transcription regulator]]
+
-
[[Category: Transcriptional regulator]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 21:25:58 2008''
+

Current revision

Crystal structure of transcriptional regulator (GntR family member) from Pseudomonas syringae pv. tomato str. DC3000

PDB ID 3c7j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools