This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 3cin

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (20:07, 7 January 2013) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 3cin, resolution 1.700&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3cin]], [[Resolution|resolution]] 1.70&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE= <scene name='pdbsite=AC1:Cl+Binding+Site+For+Residue+A+383'>AC1</scene>, <scene name='pdbsite=AC2:Cl+Binding+Site+For+Residue+A+384'>AC2</scene>, <scene name='pdbsite=AC3:Cl+Binding+Site+For+Residue+A+385'>AC3</scene>, <scene name='pdbsite=AC4:Mg+Binding+Site+For+Residue+A+386'>AC4</scene> and <scene name='pdbsite=AC5:Nad+Binding+Site+For+Residue+A+400'>AC5</scene>
+
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Inositol-3-phosphate_synthase Inositol-3-phosphate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.5.1.4 5.5.1.4] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Inositol-3-phosphate_synthase Inositol-3-phosphate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.5.1.4 5.5.1.4] </span>
|GENE= TM1419, TM_1419 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 Thermotoga maritima MSB8])
|GENE= TM1419, TM_1419 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 Thermotoga maritima MSB8])
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam07994 NAD_binding_5], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1260 INO1]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cin FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cin OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cin RCSB], [http://www.ebi.ac.uk/pdbsum/3cin PDBsum], [http://www.topsan.org/Proteins/JCSG/3cin TOPSAN]</span>
-
|RELATEDENTRY=
+
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/3cinA01 3Cina01], [http://www.cathdb.info/domain/3cinA02 3Cina02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016040 Ipr016040], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013021 Ipr013021], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002587 Ipr002587]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07994 PF07994]</span>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cin FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cin OCA], [http://www.ebi.ac.uk/pdbsum/3cin PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3cin RCSB]</span>
+
|uPDB=3CIN|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_3cin_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
3cin, resolution 1.70Å ()
Ligands: , ,
Gene: TM1419, TM_1419 (Thermotoga maritima MSB8)
Activity: Inositol-3-phosphate synthase, with EC number 5.5.1.4
Resources: FirstGlance, OCA, RCSB, PDBsum, TOPSAN
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_3cin"
Personal tools