This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ptn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:19, 13 February 2019) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ptn.gif|left|200px]]
 
-
<!--
+
==ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY==
-
The line below this paragraph, containing "STRUCTURE_3ptn", creates the "Structure Box" on the page.
+
<StructureSection load='3ptn' size='340' side='right' caption='[[3ptn]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ptn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PTN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PTN FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
-->
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
-
{{STRUCTURE_3ptn| PDB=3ptn | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ptn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ptn OCA], [http://pdbe.org/3ptn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ptn RCSB], [http://www.ebi.ac.uk/pdbsum/3ptn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ptn ProSAT]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pt/3ptn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ptn ConSurf].
 +
<div style="clear:both"></div>
-
'''ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY'''
+
==See Also==
-
 
+
*[[Trypsin|Trypsin]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3PTN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PTN OCA].
+
[[Category: Bovin]]
-
[[Category: Bos taurus]]
+
-
[[Category: Single protein]]
+
[[Category: Trypsin]]
[[Category: Trypsin]]
-
[[Category: Bartunik, H.]]
+
[[Category: Bartunik, H]]
-
[[Category: Bode, W.]]
+
[[Category: Bode, W]]
-
[[Category: Huber, R.]]
+
[[Category: Huber, R]]
-
[[Category: Singh, T P.]]
+
[[Category: Singh, T P]]
-
[[Category: Steigemann, W.]]
+
[[Category: Steigemann, W]]
-
[[Category: Walter, J.]]
+
[[Category: Walter, J]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 22:11:24 2008''
+

Current revision

ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY

3ptn, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools