Template:STRUCTURE 1d66
From Proteopedia
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| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1d66, resolution 2. | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1d66]], [[Resolution|resolution]] 2.70Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | ||
|LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene> | |LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene> | ||
| - | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d66 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1d66 RCSB], [http://www.ebi.ac.uk/pdbsum/1d66 PDBsum]</span> | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d66 OCA], [http://www. | + | |
|FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016563 | text = transcription activator activity}}{{GO|id=GO:0008270 | text = zinc ion binding}} | |FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016563 | text = transcription activator activity}}{{GO|id=GO:0008270 | text = zinc ion binding}} | ||
|PROCESS={{GO|id=GO:0005975 | text = carbohydrate metabolic process}}{{GO|id=GO:0000411 | text = positive regulation of transcription by galactose}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0006012 | text = galactose metabolic process}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}} | |PROCESS={{GO|id=GO:0005975 | text = carbohydrate metabolic process}}{{GO|id=GO:0000411 | text = positive regulation of transcription by galactose}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0006012 | text = galactose metabolic process}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}} | ||
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}} | |COMPONENT={{GO|id=GO:0005634 | text = nucleus}} | ||
| - | |SARESOURCES=<span class='plainlinks'> | + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1d66B01 1D66B01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007219 Ipr007219], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005600 Ipr005600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001138 Ipr001138], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002409 Ipr002409]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00172 PF00172], [http://pfam.sanger.ac.uk/family?acc=PF03902 PF03902]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=45510 d1d66a2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=45076 d1d66a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=45077 d1d66b1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=45511 d1d66b2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P04386 P04386]</span> |
| + | |uPDB=1D66|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_1d66_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>E [x]</text> | ||
| + | <name>jmb_1d66_E</name> | ||
| + | <title>toggle chain E</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1d66_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_1d66_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 1d66, resolution 2.70Å () | |||||||||
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| Ligands: | |||||||||
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| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
