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Template:STRUCTURE 2a07
From Proteopedia
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| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2a07, resolution 1. | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2a07]], [[Resolution|resolution]] 1.90Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | ||
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | |LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | ||
| - | |ACTIVITY= | ||
|GENE= FOXP2, CAGH44, TNRC10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= FOXP2, CAGH44, TNRC10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
| - | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a07 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2a07 RCSB], [http://www.ebi.ac.uk/pdbsum/2a07 PDBsum]</span> | |
| - | + | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a07 OCA], [http://www. | + | |
|FUNCTION={{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0042803 | text = protein homodimerization activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0003677 | text = DNA binding}} | |FUNCTION={{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0042803 | text = protein homodimerization activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0003677 | text = DNA binding}} | ||
|PROCESS={{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0021758 | text = putamen development}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0021757 | text = caudate nucleus development}} | |PROCESS={{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0021758 | text = putamen development}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0021757 | text = caudate nucleus development}} | ||
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}} | |COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}} | ||
| - | |SARESOURCES=<span class='plainlinks' | + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001766 Ipr001766], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015880 Ipr015880], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011991 Ipr011991], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007087 Ipr007087]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00250 PF00250]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O15409 O15409]</span> |
| + | |uPDB=2A07|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2a07_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_2a07_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_2a07_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_2a07_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>E [x]</text> | ||
| + | <name>jmb_2a07_E</name> | ||
| + | <title>toggle chain E</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>F [x]</text> | ||
| + | <name>jmb_2a07_F</name> | ||
| + | <title>toggle chain F</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>G [x]</text> | ||
| + | <name>jmb_2a07_G</name> | ||
| + | <title>toggle chain G</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>H [x]</text> | ||
| + | <name>jmb_2a07_H</name> | ||
| + | <title>toggle chain H</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>I [x]</text> | ||
| + | <name>jmb_2a07_I</name> | ||
| + | <title>toggle chain I</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>J [x]</text> | ||
| + | <name>jmb_2a07_J</name> | ||
| + | <title>toggle chain J</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
| |||||||||
| 2a07, resolution 1.90Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | |||||||||
| Gene: | FOXP2, CAGH44, TNRC10 (Homo sapiens) | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

