1bq3

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(New page: 200px<br /><applet load="1bq3" size="450" color="white" frame="true" align="right" spinBox="true" caption="1bq3, resolution 2.7&Aring;" /> '''SACCHAROMYCES CEREVIS...)
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[[Image:1bq3.jpg|left|200px]]<br /><applet load="1bq3" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1bq3, resolution 2.7&Aring;" />
 
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'''SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH INOSITOL HEXAKISPHOSPHATE'''<br />
 
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==Overview==
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==SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH INOSITOL HEXAKISPHOSPHATE==
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The effects that the inhibitors inositol hexakisphosphate and benzene, tri-, tetra- and hexacarboxylates have on the phosphoglycerate mutases, from Saccharomyces cerevisiae and Schizosaccharomyces pombe have been, determined. Their Kivalues have been calculated, and the ability of the, inhibitors to protect the enzymes against limited proteolysis, investigated. These biochemical data have been placed in a structural, context by the solution of the crystal structures of S. cerevisiae, phosphoglycerate mutase soaked with inositol hexakisphosphate or benzene, hexacarboxylate. These large polyanionic compounds bind to the enzyme so, as to block the entrance to the active-site cleft. They form multiple, interactions with the enzyme, consistent with their low Kivalues, and, afford good protection against limited proteolysis of the C-terminal, region by thermolysin. The inositol compound is more efficacious because, of its greater number of negative charges. The S. pombe phosphoglycerate, mutase that is inherently lacking a comparable C-terminal region has, higher Kivalues for the compounds tested. Moreover, the S. pombe enzyme is, less sensititive to proteolysis, and the presence or absence of the, inhibitor molecules has little effect on susceptibility to proteolysis.
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<StructureSection load='1bq3' size='340' side='right'caption='[[1bq3]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1bq3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BQ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BQ3 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IHP:INOSITOL+HEXAKISPHOSPHATE'>IHP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bq3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bq3 OCA], [https://pdbe.org/1bq3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bq3 RCSB], [https://www.ebi.ac.uk/pdbsum/1bq3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bq3 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PMG1_YEAST PMG1_YEAST] Interconversion of 3- and 2-phosphoglycerate with 2,3-bisphosphoglycerate as the primer of the reaction. Can also Catalyze the reaction of EC 5.4.2.4 (synthase) and EC 3.1.3.13 (phosphatase), but with a reduced activity.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bq/1bq3_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bq3 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The effects that the inhibitors inositol hexakisphosphate and benzene tri-, tetra- and hexacarboxylates have on the phosphoglycerate mutases from Saccharomyces cerevisiae and Schizosaccharomyces pombe have been determined. Their Kivalues have been calculated, and the ability of the inhibitors to protect the enzymes against limited proteolysis investigated. These biochemical data have been placed in a structural context by the solution of the crystal structures of S. cerevisiae phosphoglycerate mutase soaked with inositol hexakisphosphate or benzene hexacarboxylate. These large polyanionic compounds bind to the enzyme so as to block the entrance to the active-site cleft. They form multiple interactions with the enzyme, consistent with their low Kivalues, and afford good protection against limited proteolysis of the C-terminal region by thermolysin. The inositol compound is more efficacious because of its greater number of negative charges. The S. pombe phosphoglycerate mutase that is inherently lacking a comparable C-terminal region has higher Kivalues for the compounds tested. Moreover, the S. pombe enzyme is less sensititive to proteolysis, and the presence or absence of the inhibitor molecules has little effect on susceptibility to proteolysis.
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==About this Structure==
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Polyanionic inhibitors of phosphoglycerate mutase: combined structural and biochemical analysis.,Rigden DJ, Walter RA, Phillips SE, Fothergill-Gilmore LA J Mol Biol. 1999 Jun 18;289(4):691-9. PMID:10369755<ref>PMID:10369755</ref>
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1BQ3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] with SO4 and IHP as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phosphoglycerate_mutase Phosphoglycerate mutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.1 5.4.2.1] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1BQ3 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Polyanionic inhibitors of phosphoglycerate mutase: combined structural and biochemical analysis., Rigden DJ, Walter RA, Phillips SE, Fothergill-Gilmore LA, J Mol Biol. 1999 Jun 18;289(4):691-9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=10369755 10369755]
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</div>
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[[Category: Phosphoglycerate mutase]]
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<div class="pdbe-citations 1bq3" style="background-color:#fffaf0;"></div>
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Single protein]]
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[[Category: Fothergill-Gilmore, L.A.]]
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[[Category: Phillips, S.E.V.]]
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[[Category: Rigden, D.J.]]
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[[Category: IHP]]
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[[Category: SO4]]
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[[Category: glycolytic enzyme]]
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[[Category: isomerase]]
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[[Category: transferase (phosphoryl)]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 11:49:45 2007''
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==See Also==
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*[[Phosphoglycerate mutase 3D structures|Phosphoglycerate mutase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Fothergill-Gilmore LA]]
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[[Category: Phillips SEV]]
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[[Category: Rigden DJ]]

Current revision

SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH INOSITOL HEXAKISPHOSPHATE

PDB ID 1bq3

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