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3bgk
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3bgk is ON HOLD until Paper Publication Authors: Liang, Y.H., Zhou, Y.F., Li, L.F., Su, X.D., Yang, C. Description: The crystal structure of hypoth...) |
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| - | '''Unreleased structure''' | ||
| - | The | + | ==The crystal structure of hypothetic protein SMU.573 from Streptococcus mutans== |
| - | + | <StructureSection load='3bgk' size='340' side='right'caption='[[3bgk]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3bgk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_25175 Atcc 25175]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BGK FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SMU.573 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1309 ATCC 25175])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bgk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bgk OCA], [https://pdbe.org/3bgk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bgk RCSB], [https://www.ebi.ac.uk/pdbsum/3bgk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bgk ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/Q8DVC0_STRMU Q8DVC0_STRMU]] Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity).[HAMAP-Rule:MF_01965] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/3bgk_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bgk ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Atcc 25175]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Liang, Y H]] | ||
| + | [[Category: Su, X D]] | ||
| + | [[Category: Yang, C]] | ||
| + | [[Category: Zhou, Y F]] | ||
| + | [[Category: Alpha/beta three layer sandwich]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
The crystal structure of hypothetic protein SMU.573 from Streptococcus mutans
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