3d1p
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3d1p is ON HOLD Authors: Nocek, B., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genom...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae== | |
| - | + | <StructureSection load='3d1p' size='340' side='right'caption='[[3d1p]], [[Resolution|resolution]] 0.98Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3d1p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D1P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D1P FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YOR285W ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr> | |
| - | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Thiosulfate_sulfurtransferase Thiosulfate sulfurtransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.8.1.1 2.8.1.1] </span></td></tr> | |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d1p OCA], [https://pdbe.org/3d1p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d1p RCSB], [https://www.ebi.ac.uk/pdbsum/3d1p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d1p ProSAT], [https://www.topsan.org/Proteins/MCSG/3d1p TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/RDL1_YEAST RDL1_YEAST]] Thiosulfate sulfurtransferase which catalyzes the transfer of sulfane sulfur from thiosulfate to cyanide.<ref>PMID:19864628</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/3d1p_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d1p ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Atcc 18824]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thiosulfate sulfurtransferase]] | ||
| + | [[Category: Edwards, A M]] | ||
| + | [[Category: Evdokimova, E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kudritska, M]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nocek, B]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Atomic resolution structure]] | ||
| + | [[Category: Atomic structure]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: Mitochondrial rhodanese-like protein]] | ||
| + | [[Category: Mitochondrion]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Transferase]] | ||
Current revision
Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae
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Categories: Atcc 18824 | Large Structures | Thiosulfate sulfurtransferase | Edwards, A M | Evdokimova, E | Joachimiak, A | Kudritska, M | Structural genomic | Nocek, B | Savchenko, A | Atomic resolution structure | Atomic structure | Mcsg | Mitochondrial rhodanese-like protein | Mitochondrion | PSI, Protein structure initiative | Transferase
