3d7r
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3d7r is ON HOLD until Paper Publication Authors: Lam, R., Battaile, K.P., Chan, T., Romanov, V., Lam, K., Soloveychik, M., Wu-Brown, J., Pai, E.F., ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of a putative esterase from Staphylococcus aureus== | |
| - | + | <StructureSection load='3d7r' size='340' side='right'caption='[[3d7r]], [[Resolution|resolution]] 2.01Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3d7r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 Staphylococcus aureus subsp. aureus USA300_TCH1516]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D7R FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d7r OCA], [https://pdbe.org/3d7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d7r RCSB], [https://www.ebi.ac.uk/pdbsum/3d7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d7r ProSAT]</span></td></tr> | |
| - | + | </table> | |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d7/3d7r_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d7r ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Staphylococcus aureus subsp. aureus USA300_TCH1516]] | ||
| + | [[Category: Battaile KP]] | ||
| + | [[Category: Chan T]] | ||
| + | [[Category: Chirgadze NY]] | ||
| + | [[Category: Lam K]] | ||
| + | [[Category: Lam R]] | ||
| + | [[Category: Pai EF]] | ||
| + | [[Category: Romanov V]] | ||
| + | [[Category: Soloveychik M]] | ||
| + | [[Category: Wu-Brown J]] | ||
Current revision
Crystal structure of a putative esterase from Staphylococcus aureus
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