Template:STRUCTURE 1ppb
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1ppb, resolution 1.92Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1ppb]], [[Resolution|resolution]] 1.92Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | |LIGAND= <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=0G6:D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE'>0G6</scene> |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5] </span> | ||
| - | | | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ppb RCSB], [http://www.ebi.ac.uk/pdbsum/1ppb PDBsum]</span> |
| - | | | + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1ppbH01 1Ppbh01], [http://www.cathdb.info/domain/1ppbH02 1Ppbh02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000001 Ipr000001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009003 Ipr009003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017857 Ipr017857], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003966 Ipr003966], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018992 Ipr018992], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013806 Ipr013806], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018056 Ipr018056], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001254 Ipr001254], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018114 Ipr018114], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000294 Ipr000294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001314 Ipr001314]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00089 PF00089], [http://pfam.sanger.ac.uk/family?acc=PF09396 PF09396]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=26089 d1ppb.1]</span> |
| - | + | |uPDB=1PPB|CONSURF={{!}}- | |
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>L [x]</text> | ||
| + | <name>jmb_1ppb_L</name> | ||
| + | <title>toggle chain L</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>H [x]</text> | ||
| + | <name>jmb_1ppb_H</name> | ||
| + | <title>toggle chain H</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>I [x]</text> | ||
| + | <name>jmb_1ppb_I</name> | ||
| + | <title>toggle chain I</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
| |||||||||
| 1ppb, resolution 1.92Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | |||||||||
| Activity: | Thrombin, with EC number 3.4.21.5 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

