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Template:STRUCTURE 2amy
From Proteopedia
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| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2amy, resolution 2. | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2amy]], [[Resolution|resolution]] 2.09Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene> | |LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphomannomutase Phosphomannomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.8 5.4.2.8] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphomannomutase Phosphomannomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.8 5.4.2.8] </span> | ||
|GENE= HS.459855 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= HS.459855 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03332 PMM]</span> | ||
|NONSTDRES=<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene> | |NONSTDRES=<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene> | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2amy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2amy OCA], [http://www.ebi.ac.uk/pdbsum/2amy PDBsum], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2amy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2amy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2amy RCSB], [http://www.ebi.ac.uk/pdbsum/2amy PDBsum], [http://www.topsan.org/Proteins/CESG/2amy TOPSAN]</span> |
|FUNCTION={{GO|id=GO:0004615 | text = phosphomannomutase activity}}{{GO|id=GO:0016853 | text = isomerase activity}}{{GO|id=GO:0003824 | text = catalytic activity}} | |FUNCTION={{GO|id=GO:0004615 | text = phosphomannomutase activity}}{{GO|id=GO:0016853 | text = isomerase activity}}{{GO|id=GO:0003824 | text = catalytic activity}} | ||
|PROCESS={{GO|id=GO:0009298 | text = GDP-mannose biosynthetic process}}{{GO|id=GO:0019307 | text = mannose biosynthetic process}}{{GO|id=GO:0006487 | text = protein amino acid N-linked glycosylation}}{{GO|id=GO:0006486 | text = protein amino acid glycosylation}}{{GO|id=GO:0008152 | text = metabolic process}} | |PROCESS={{GO|id=GO:0009298 | text = GDP-mannose biosynthetic process}}{{GO|id=GO:0019307 | text = mannose biosynthetic process}}{{GO|id=GO:0006487 | text = protein amino acid N-linked glycosylation}}{{GO|id=GO:0006486 | text = protein amino acid glycosylation}}{{GO|id=GO:0008152 | text = metabolic process}} | ||
|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | |COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005002 Ipr005002], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006379 Ipr006379]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03332 PF03332]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O15305 O15305]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005002 Ipr005002], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006379 Ipr006379]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03332 PF03332]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O15305 O15305]</span> | ||
| - | | | + | |uPDB=2AMY|CONSURF={{!}}- |
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2amy_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 2amy, resolution 2.09Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , | ||||||||
| Non-Standard Residues: | |||||||||
| Gene: | HS.459855 (Homo sapiens) | ||||||||
| Activity: | Phosphomannomutase, with EC number 5.4.2.8 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum, TOPSAN | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
