Template:STRUCTURE 2v1x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:37, 11 March 2013) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{StructureD
+
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2v1x, resolution 2.00&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2v1x]], [[Resolution|resolution]] 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE= <scene name='pdbsite=AC1:Edo+Binding+Site+For+Chain+B'>AC1</scene>
+
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00269 DEXHc], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00079 HELICc]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v1x OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2v1x RCSB], [http://www.ebi.ac.uk/pdbsum/2v1x PDBsum]</span>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v1x OCA], [http://www.ebi.ac.uk/pdbsum/2v1x PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v1x RCSB]</span>
+
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001650 Ipr001650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018329 Ipr018329], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014021 Ipr014021], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014001 Ipr014001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011545 Ipr011545], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004589 Ipr004589]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00271 PF00271], [http://pfam.sanger.ac.uk/family?acc=PF00270 PF00270]<br>UniProt : [http://www.uniprot.org/uniprot/P46063 P46063]</span>
-
|FUNCTION={{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0008026 | text = ATP-dependent helicase activity}}{{GO|id=GO:0004003 | text = ATP-dependent DNA helicase activity}}{{GO|id=GO:0004386 | text = helicase activity}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0003678 | text = DNA helicase activity}}
+
|uPDB=2V1X|CONSURF={{!}}-
-
|PROCESS={{GO|id=GO:0006281 | text = DNA repair}}{{GO|id=GO:0006310 | text = DNA recombination}}
+
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
-
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
+
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
-
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014021 Ipr014021], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011545 Ipr011545], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014001 Ipr014001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004589 Ipr004589], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001650 Ipr001650]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00270 PF00270], [http://pfam.sanger.ac.uk/family?acc=PF00271 PF00271]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P46063 P46063]</span>
+
{{!}} '''Toggle Conservation Colors:'''
-
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=P46063 P46063]</span>
+
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_2v1x_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_2v1x_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
2v1x, resolution 2.00Å ()
Ligands: , , , ,
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_2v1x"
Personal tools