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Template:STRUCTURE 2ysu

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Current revision

2ysu, resolution 3.50Å ()

Structural annotation:
Resources:	InterPro : Ipr010917, Ipr010101, Ipr012910, Ipr010916, Ipr000531, Ipr003058, Ipr003615, Ipr002711 Pfam : PF07715, PF00593 UniProt : P06129, P04419

Functional annotation:
Cellular component:	outer membrane integral to membrane membrane extrachromosomal circular DNA
Biological process:	transport detection of virus entry of virus into host cell cobalamin transport defense response to bacterium pathogenesis cytolysis
Molecular function:	protein binding calcium ion binding cobalamin transporter activity metal ion binding transporter activity receptor activity endonuclease activity receptor binding nucleic acid binding nuclease activity zinc ion binding hydrolase activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_2ysu"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2ysu, resolution 3.50&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2ysu]], [[Resolution|resolution]] 3.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01347 ligand_gated_channel], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10641 btuB]</span>
 |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysu OCA], [http://www.ebi.ac.uk/pdbsum/2ysu PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ysu RCSB]</span>
 |FUNCTION={{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0015235 | text = cobalamin transporter activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0005215 | text = transporter activity}}{{GO|id=GO:0004872 | text = receptor activity}}{{GO|id=GO:0004519 | text = endonuclease activity}}{{GO|id=GO:0005102 | text = receptor binding}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0004518 | text = nuclease activity}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0016787 | text = hydrolase activity}}
@@ Line 7: / Line 6: @@
 |COMPONENT={{GO|id=GO:0019867 | text = outer membrane}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0005727 | text = extrachromosomal circular DNA}}
 |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010917 Ipr010917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010101 Ipr010101], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012910 Ipr012910], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010916 Ipr010916], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000531 Ipr000531], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003615 Ipr003615], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002711 Ipr002711]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07715 PF07715], [http://pfam.sanger.ac.uk/family?acc=PF00593 PF00593]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06129 P06129], [http://ca.expasy.org/cgi-bin/niceprot.pl?P04419 P04419]</span>
+|uPDB=2YSU|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_2ysu_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_2ysu_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 2ysu

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