We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

Template:STRUCTURE 1f1j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:27, 3 July 2013) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{StructureD
+
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1f1j, resolution 2.35&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1f1j]], [[Resolution|resolution]] 2.35&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|LIGAND= <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00032 CASc]</span>
+
|NONSTDRES=<scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ASJ:(3S)-3-AMINO-4-HYDROXYBUTANOIC+ACID'>ASJ</scene>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1f1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f1j OCA], [http://www.ebi.ac.uk/pdbsum/1f1j PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1f1j RCSB]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1f1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f1j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1f1j RCSB], [http://www.ebi.ac.uk/pdbsum/1f1j PDBsum]</span>
-
|FUNCTION={{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0008234 | text = cysteine-type peptidase activity}}{{GO|id=GO:0030693 | text = caspase activity}}{{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0008233 | text = peptidase activity}}
+
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1f1jA00 1F1Ja00], [http://www.cathdb.info/domain/1f1jB00 1F1Jb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001309 Ipr001309], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011600 Ipr011600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016129 Ipr016129], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015917 Ipr015917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015471 Ipr015471], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002398 Ipr002398], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002138 Ipr002138]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00656 PF00656]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=59596 d1f1ja_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=59597 d1f1jb_]</span>
-
|PROCESS={{GO|id=GO:0008632 | text = apoptotic program}}{{GO|id=GO:0006915 | text = apoptosis}}{{GO|id=GO:0006508 | text = proteolysis}}{{GO|id=GO:0001836 | text = release of cytochrome c from mitochondria}}{{GO|id=GO:0007507 | text = heart development}}{{GO|id=GO:0009411 | text = response to UV}}
+
|uPDB=1F1J|CONSURF={{!}}-
-
|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0005789 | text = endoplasmic reticulum membrane}}{{GO|id=GO:0031966 | text = mitochondrial membrane}}
+
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
-
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1f1jA00 1F1Ja00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1f1jB00 1F1Jb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015917 Ipr015917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002138 Ipr002138], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001309 Ipr001309], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011600 Ipr011600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002398 Ipr002398], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015471 Ipr015471]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00656 PF00656]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=59596 d1f1ja_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=59597 d1f1jb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P55210 P55210]</span>
+
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
-
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=CASP7 CASP7]</span>
+
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
1f1j, resolution 2.35Å ()
Ligands:
Non-Standard Residues: ,
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools