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1a63

From Proteopedia

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{{Seed}}
 
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[[Image:1a63.png|left|200px]]
 
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==THE NMR STRUCTURE OF THE RNA BINDING DOMAIN OF E.COLI RHO FACTOR SUGGESTS POSSIBLE RNA-PROTEIN INTERACTIONS, 10 STRUCTURES==
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The line below this paragraph, containing "STRUCTURE_1a63", creates the "Structure Box" on the page.
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<StructureSection load='1a63' size='340' side='right'caption='[[1a63]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1a63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1A63 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1a63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a63 OCA], [https://pdbe.org/1a63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1a63 RCSB], [https://www.ebi.ac.uk/pdbsum/1a63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1a63 ProSAT]</span></td></tr>
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{{STRUCTURE_1a63| PDB=1a63 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RHO_ECOLI RHO_ECOLI] Facilitates transcription termination by a mechanism that involves rho binding to the nascent RNA, activation of rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template. RNA-dependent NTPAse which utilizes all four ribonucleoside triphosphates as substrates.[HAMAP-Rule:MF_01884]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a6/1a63_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1a63 ConSurf].
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<div style="clear:both"></div>
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===THE NMR STRUCTURE OF THE RNA BINDING DOMAIN OF E.COLI RHO FACTOR SUGGESTS POSSIBLE RNA-PROTEIN INTERACTIONS, 10 STRUCTURES===
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==See Also==
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*[[Helicase 3D structures|Helicase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_9587002}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 9587002 is the PubMed ID number.
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[[Category: Allison TJ]]
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[[Category: Briercheck DM]]
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{{ABSTRACT_PUBMED_9587002}}
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[[Category: Richardson JP]]
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[[Category: Rule GS]]
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==About this Structure==
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[[Category: Wood TC]]
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1A63 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A63 OCA].
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==Reference==
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The NMR structure of the RNA binding domain of E. coli rho factor suggests possible RNA-protein interactions., Briercheck DM, Wood TC, Allison TJ, Richardson JP, Rule GS, Nat Struct Biol. 1998 May;5(5):393-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9587002 9587002]
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[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Allison, T J.]]
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[[Category: Briercheck, D M.]]
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[[Category: Richardson, J P.]]
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[[Category: Rule, G S.]]
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[[Category: Wood, T C.]]
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[[Category: Ob fold]]
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[[Category: Rna binding domain]]
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[[Category: Termination]]
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[[Category: Transcription regulation]]
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[[Category: Transcription termination]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 16:13:07 2008''
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Current revision

THE NMR STRUCTURE OF THE RNA BINDING DOMAIN OF E.COLI RHO FACTOR SUGGESTS POSSIBLE RNA-PROTEIN INTERACTIONS, 10 STRUCTURES

PDB ID 1a63

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