1axj

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{{Seed}}
 
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[[Image:1axj.png|left|200px]]
 
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==FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES==
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The line below this paragraph, containing "STRUCTURE_1axj", creates the "Structure Box" on the page.
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<StructureSection load='1axj' size='340' side='right'caption='[[1axj]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1axj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'Miyazaki_F' Desulfovibrio vulgaris str. 'Miyazaki F']. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AXJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AXJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
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{{STRUCTURE_1axj| PDB=1axj | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1axj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1axj OCA], [https://pdbe.org/1axj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1axj RCSB], [https://www.ebi.ac.uk/pdbsum/1axj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1axj ProSAT]</span></td></tr>
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</table>
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===FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES===
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== Function ==
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[https://www.uniprot.org/uniprot/FMNB_DESVM FMNB_DESVM] Functions as a redox protein with a potential of -325 mV.
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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1AXJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AXJ OCA].
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Check<jmol>
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<jmolCheckbox>
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==Reference==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ax/1axj_consurf.spt"</scriptWhenChecked>
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Pathway of chymotrypsin evolution suggested by the structure of the FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F), Liepinsh E, Kitamura M, Murakami T, Nakaya T, Otting G, Nat Struct Biol. 1997 Dec;4(12):975-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9406543 9406543]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Desulfovibrio vulgaris]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Single protein]]
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</jmolCheckbox>
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[[Category: Liepinsh, E.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1axj ConSurf].
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[[Category: Otting, G.]]
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<div style="clear:both"></div>
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[[Category: Binding protein]]
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__TOC__
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[[Category: Fmn-binding protein]]
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</StructureSection>
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[[Category: Desulfovibrio vulgaris str. 'Miyazaki F']]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 17:48:26 2008''
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[[Category: Large Structures]]
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[[Category: Liepinsh E]]
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[[Category: Otting G]]

Current revision

FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES

PDB ID 1axj

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