1bj4

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{{Seed}}
 
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[[Image:1bj4.png|left|200px]]
 
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==RECOMBINANT SERINE HYDROXYMETHYLTRANSFERASE (HUMAN)==
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The line below this paragraph, containing "STRUCTURE_1bj4", creates the "Structure Box" on the page.
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<StructureSection load='1bj4' size='340' side='right'caption='[[1bj4]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1bj4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BJ4 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bj4 OCA], [https://pdbe.org/1bj4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bj4 RCSB], [https://www.ebi.ac.uk/pdbsum/1bj4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bj4 ProSAT]</span></td></tr>
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{{STRUCTURE_1bj4| PDB=1bj4 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GLYC_HUMAN GLYC_HUMAN] Interconversion of serine and glycine.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/1bj4_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bj4 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: Serine hydroxymethyltransferase (SHMT) is a ubiquitous enzyme found in all prokaryotes and eukaryotes. As an enzyme of the thymidylate synthase metabolic cycle, SHMT catalyses the retro-aldol cleavage of serine to glycine, with the resulting hydroxymethyl group being transferred to tetrahydrofolate to form 5, 10-methylene-tetrahydrofolate. The latter is the major source of one-carbon units in metabolism. Elevated SHMT activity has been shown to be coupled to the increased demand for DNA synthesis in rapidly proliferating cells, particularly tumour cells. Consequently, the central role of SHMT in nucleotide biosynthesis makes it an attractive target for cancer chemotherapy. RESULTS: We have solved the crystal structure of human cytosolic SHMT by multiple isomorphous replacement to 2.65 A resolution. The monomer has a fold typical for alpha class pyridoxal 5'-phosphate (PLP) dependent enzymes. The tetramer association is best described as a 'dimer of dimers' where residues from both subunits of one 'tight' dimer contribute to the active site. CONCLUSIONS: The crystal structure shows the evolutionary relationship between SHMT and other alpha class PLP-dependent enzymes, as the fold is highly conserved. Many of the results of site-directed mutagenesis studies can easily be rationalised or re-interpreted in light of the structure presented here. For example, His 151 is not the catalytic base, contrary to the findings of others. A mechanism for the cleavage of serine to glycine and formaldehyde is proposed.
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===RECOMBINANT SERINE HYDROXYMETHYLTRANSFERASE (HUMAN)===
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The crystal structure of human cytosolic serine hydroxymethyltransferase: a target for cancer chemotherapy.,Renwick SB, Snell K, Baumann U Structure. 1998 Sep 15;6(9):1105-16. PMID:9753690<ref>PMID:9753690</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1bj4" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_9753690}}, adds the Publication Abstract to the page
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*[[Serine hydroxymethyltransferase 3D structures|Serine hydroxymethyltransferase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 9753690 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_9753690}}
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__TOC__
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</StructureSection>
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==About this Structure==
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1BJ4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJ4 OCA].
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==Reference==
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The crystal structure of human cytosolic serine hydroxymethyltransferase: a target for cancer chemotherapy., Renwick SB, Snell K, Baumann U, Structure. 1998 Sep 15;6(9):1105-16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9753690 9753690]
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[[Category: Glycine hydroxymethyltransferase]]
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Renwick, S B.]]
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[[Category: Renwick SB]]
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[[Category: Snell, K.]]
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[[Category: Snell K]]
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[[Category: Metabolic role]]
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[[Category: Pyridoxal 5'-phosphate]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:14:49 2008''
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Current revision

RECOMBINANT SERINE HYDROXYMETHYLTRANSFERASE (HUMAN)

PDB ID 1bj4

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