1bu8

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{{Seed}}
 
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[[Image:1bu8.png|left|200px]]
 
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==RAT PANCREATIC LIPASE RELATED PROTEIN 2==
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The line below this paragraph, containing "STRUCTURE_1bu8", creates the "Structure Box" on the page.
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<StructureSection load='1bu8' size='340' side='right'caption='[[1bu8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BU8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BU8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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{{STRUCTURE_1bu8| PDB=1bu8 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bu8 OCA], [https://pdbe.org/1bu8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bu8 RCSB], [https://www.ebi.ac.uk/pdbsum/1bu8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bu8 ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bu/1bu8_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bu8 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The pancreas expresses several members of the lipase gene family including pancreatic triglyceride lipase (PTL) and two homologous proteins, pancreatic lipase-related proteins 1 and 2 (PLRP1 and PLRP2). Despite their similar amino acid sequences, PTL, PLRP1, and PLRP2 differ in important kinetic properties. PLRP1 has no known activity. PTL and PLRP2 differ in substrate specificity, bile acid inhibition, colipase requirement, and interfacial activation. To begin understanding the structural explanations for these functional differences, we solved the crystal structure of rat (r)PLRP2 and further characterized its kinetic properties. The 1.8 A structure of rPLRP2, like the tertiary structure of human PTL, has a globular N-terminal domain and a beta-sandwich C-terminal domain. The lid domain occupied the closed position, suggesting that rPLRP2 should show interfacial activation. When we reexamined this issue with tripropionin as substrate, rPLRP2 exhibited interfacial activation. Because the active site topology of rPLRP2 resembled that of human PTL, we predicted and demonstrated that the lipase inhibitors E600 and tetrahydrolipstatin inhibit rPLRP2. Although PTL and rPLRP2 have similar active sites, rPLRP2 has a broader substrate specificity that we confirmed using a monolayer technique. With this assay, we showed for the first time that rPLRP2 prefers phosphatidylglycerol and ethanolamine over phosphatidylcholine. In summary, we confirmed and extended the observation that PLRP2 lipases have a broader substrate specificity than PTL, we demonstrated that PLRP2 lipases show interfacial activation, and we solved the first crystal structure of a PLRP2 lipase that contains a lid domain.
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===RAT PANCREATIC LIPASE RELATED PROTEIN 2===
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Structure and activity of rat pancreatic lipase-related protein 2.,Roussel A, Yang Y, Ferrato F, Verger R, Cambillau C, Lowe M J Biol Chem. 1998 Nov 27;273(48):32121-8. PMID:9822688<ref>PMID:9822688</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_9822688}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1bu8" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 9822688 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_9822688}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1BU8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BU8 OCA].
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[[Category: Cambillau C]]
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[[Category: Roussel A]]
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==Reference==
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Structure and activity of rat pancreatic lipase-related protein 2., Roussel A, Yang Y, Ferrato F, Verger R, Cambillau C, Lowe M, J Biol Chem. 1998 Nov 27;273(48):32121-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9822688 9822688]
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[[Category: Rattus norvegicus]]
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[[Category: Single protein]]
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[[Category: Triacylglycerol lipase]]
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[[Category: Cambillau, C.]]
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[[Category: Roussel, A.]]
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[[Category: Hydrolase]]
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[[Category: Lipid degradation]]
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[[Category: Pancreatic lipase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:43:47 2008''
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Current revision

RAT PANCREATIC LIPASE RELATED PROTEIN 2

PDB ID 1bu8

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