1bvz

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{{Seed}}
 
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[[Image:1bvz.png|left|200px]]
 
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==ALPHA-AMYLASE II (TVAII) FROM THERMOACTINOMYCES VULGARIS R-47==
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The line below this paragraph, containing "STRUCTURE_1bvz", creates the "Structure Box" on the page.
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<StructureSection load='1bvz' size='340' side='right'caption='[[1bvz]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1bvz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoactinomyces_vulgaris Thermoactinomyces vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BVZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BVZ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bvz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bvz OCA], [https://pdbe.org/1bvz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bvz RCSB], [https://www.ebi.ac.uk/pdbsum/1bvz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bvz ProSAT]</span></td></tr>
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{{STRUCTURE_1bvz| PDB=1bvz | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NEPU2_THEVU NEPU2_THEVU] Hydrolyzes pullulan efficiently but only a small amount of starch. Endohydrolysis of 1,4-alpha-glucosidic linkages in pullulan to form panose. Cleaves also (1-6)-alpha-glucosidic linkages to form maltotriose.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bv/1bvz_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bvz ConSurf].
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<div style="clear:both"></div>
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===ALPHA-AMYLASE II (TVAII) FROM THERMOACTINOMYCES VULGARIS R-47===
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==See Also==
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*[[Amylase 3D structures|Amylase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_10222200}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 10222200 is the PubMed ID number.
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{{ABSTRACT_PUBMED_10222200}}
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==About this Structure==
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1BVZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermoactinomyces_vulgaris Thermoactinomyces vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BVZ OCA].
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==Reference==
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Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVAII) hydrolyzing cyclodextrins and pullulan at 2.6 A resolution., Kamitori S, Kondo S, Okuyama K, Yokota T, Shimura Y, Tonozuka T, Sakano Y, J Mol Biol. 1999 Apr 16;287(5):907-21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10222200 10222200]
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[[Category: Neopullulanase]]
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[[Category: Single protein]]
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[[Category: Thermoactinomyces vulgaris]]
[[Category: Thermoactinomyces vulgaris]]
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[[Category: Kamitori, S.]]
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[[Category: Kamitori S]]
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[[Category: Kondo, S.]]
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[[Category: Kondo S]]
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[[Category: Okuyama, K.]]
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[[Category: Okuyama K]]
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[[Category: Sakano, Y.]]
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[[Category: Sakano Y]]
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[[Category: Shimura, Y.]]
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[[Category: Shimura Y]]
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[[Category: Tonozuka, T.]]
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[[Category: Tonozuka T]]
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[[Category: Yokota, T.]]
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[[Category: Yokota T]]
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[[Category: Hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:48:25 2008''
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Current revision

ALPHA-AMYLASE II (TVAII) FROM THERMOACTINOMYCES VULGARIS R-47

PDB ID 1bvz

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