This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1bxb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:39, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1bxb.png|left|200px]]
 
-
<!--
+
==XYLOSE ISOMERASE FROM THERMUS THERMOPHILUS==
-
The line below this paragraph, containing "STRUCTURE_1bxb", creates the "Structure Box" on the page.
+
<StructureSection load='1bxb' size='340' side='right'caption='[[1bxb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1bxb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BXB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BXB FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bxb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bxb OCA], [https://pdbe.org/1bxb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bxb RCSB], [https://www.ebi.ac.uk/pdbsum/1bxb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bxb ProSAT]</span></td></tr>
-
{{STRUCTURE_1bxb| PDB=1bxb | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XYLA_THET8 XYLA_THET8]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bx/1bxb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bxb ConSurf].
 +
<div style="clear:both"></div>
-
===XYLOSE ISOMERASE FROM THERMUS THERMOPHILUS===
+
==See Also==
-
 
+
*[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10329168}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 10329168 is the PubMed ID number.
+
[[Category: Thermus thermophilus HB8]]
-
-->
+
[[Category: Chang C]]
-
{{ABSTRACT_PUBMED_10329168}}
+
[[Category: Lee D-S]]
-
 
+
[[Category: Park BC]]
-
==About this Structure==
+
[[Category: Suh SW]]
-
1BXB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BXB OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structures of thermostable xylose isomerases from Thermus caldophilus and Thermus thermophilus: possible structural determinants of thermostability., Chang C, Park BC, Lee DS, Suh SW, J Mol Biol. 1999 May 14;288(4):623-34. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10329168 10329168]
+
-
[[Category: Single protein]]
+
-
[[Category: Thermus thermophilus]]
+
-
[[Category: Xylose isomerase]]
+
-
[[Category: Chang, C.]]
+
-
[[Category: Lee, D S.]]
+
-
[[Category: Park, B C.]]
+
-
[[Category: Suh, S W.]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Xylose metabolism]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:52:07 2008''
+

Current revision

XYLOSE ISOMERASE FROM THERMUS THERMOPHILUS

PDB ID 1bxb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1bxb"
Personal tools