1c3f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:40, 7 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1c3f.png|left|200px]]
 
-
<!--
+
==Endo-Beta-N-Acetylglucosaminidase H, D130N Mutant==
-
The line below this paragraph, containing "STRUCTURE_1c3f", creates the "Structure Box" on the page.
+
<StructureSection load='1c3f' size='340' side='right'caption='[[1c3f]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1c3f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_plicatus Streptomyces plicatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C3F FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c3f OCA], [https://pdbe.org/1c3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c3f RCSB], [https://www.ebi.ac.uk/pdbsum/1c3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c3f ProSAT]</span></td></tr>
-
{{STRUCTURE_1c3f| PDB=1c3f | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===ENDO-BETA-N-ACETYLGLUCOSAMINIDASE H, D130N MUTANT===
+
[https://www.uniprot.org/uniprot/EBAG_STRPL EBAG_STRPL] Cleaves asparagine-linked oligomannose and hybrid, but not complex, oligosaccharides from glycoproteins.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10595536}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 10595536 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c3/1c3f_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_10595536}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1c3f ConSurf].
-
1C3F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_plicatus Streptomyces plicatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C3F OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
Mutations of endo-beta-N-acetylglucosaminidase H active site residueAs sp130 anG glu132: activities and conformations., Rao V, Cui T, Guan C, Van Roey P, Protein Sci. 1999 Nov;8(11):2338-46. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10595536 10595536]
+
[[Category: Large Structures]]
-
[[Category: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase]]
+
-
[[Category: Single protein]]
+
[[Category: Streptomyces plicatus]]
[[Category: Streptomyces plicatus]]
-
[[Category: Cui, T.]]
+
[[Category: Cui T]]
-
[[Category: Guan, C.]]
+
[[Category: Guan C]]
-
[[Category: Rao, V.]]
+
[[Category: Rao V]]
-
[[Category: Roey, P Van.]]
+
[[Category: Van Roey P]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 20:09:15 2008''
+

Current revision

Endo-Beta-N-Acetylglucosaminidase H, D130N Mutant

PDB ID 1c3f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools