Template:STRUCTURE 1cdw

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{{StructureD
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{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1cdw, resolution 1.90&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1cdw]], [[Resolution|resolution]] 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04516 TBP_eukaryotes], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2101 SPT15]</span>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cdw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1cdw RCSB], [http://www.ebi.ac.uk/pdbsum/1cdw PDBsum]</span>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cdw OCA], [http://www.ebi.ac.uk/pdbsum/1cdw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cdw RCSB]</span>
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|FUNCTION={{GO|id=GO:0016251 | text = general RNA polymerase II transcription factor activity}}{{GO|id=GO:0005488 | text = binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0003702 | text = RNA polymerase II transcription factor activity}}
|FUNCTION={{GO|id=GO:0016251 | text = general RNA polymerase II transcription factor activity}}{{GO|id=GO:0005488 | text = binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0003702 | text = RNA polymerase II transcription factor activity}}
|PROCESS={{GO|id=GO:0006367 | text = transcription initiation from RNA polymerase II promoter}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0008219 | text = cell death}}{{GO|id=GO:0006366 | text = transcription from RNA polymerase II promoter}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
|PROCESS={{GO|id=GO:0006367 | text = transcription initiation from RNA polymerase II promoter}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0008219 | text = cell death}}{{GO|id=GO:0006366 | text = transcription from RNA polymerase II promoter}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005669 | text = transcription factor TFIID complex}}
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005669 | text = transcription factor TFIID complex}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA02 1Cdwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA01 1Cdwa01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012295 Ipr012295], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012294 Ipr012294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000814 Ipr000814]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00352 PF00352]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=41212 d1cdwa1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=41213 d1cdwa2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P20226 P20226]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA02 1Cdwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA01 1Cdwa01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012295 Ipr012295], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012294 Ipr012294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000814 Ipr000814]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00352 PF00352]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=41212 d1cdwa1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=41213 d1cdwa2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P20226 P20226]</span>
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|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=TBP TBP]</span>
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|uPDB=1CDW|CONSURF={{!}}-
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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<jmol>
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<jmolButton>
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<script></script>
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<text>B [x]</text>
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<name>jmb_1cdw_B</name>
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<title>toggle chain B</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>C [x]</text>
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<name>jmb_1cdw_C</name>
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<title>toggle chain C</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>A [x]</text>
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<name>jmb_1cdw_A</name>
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<title>toggle chain A</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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}}
}}

Current revision

Drag the structure with the mouse to rotate
1cdw, resolution 1.90Å ()
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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