Template:STRUCTURE 1cma
From Proteopedia
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- | {{ | + | {{Structure |
- | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1cma, resolution 2.80Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1cma]], [[Resolution|resolution]] 2.80Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene> | |LIGAND= <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene> | ||
- | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cma FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cma OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1cma RCSB], [http://www.ebi.ac.uk/pdbsum/1cma PDBsum]</span> | |
- | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cma FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cma OCA], [http://www. | + | |
|FUNCTION={{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016564 | text = transcription repressor activity}}{{GO|id=GO:0003700 | text = transcription factor activity}} | |FUNCTION={{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016564 | text = transcription repressor activity}}{{GO|id=GO:0003700 | text = transcription factor activity}} | ||
|PROCESS={{GO|id=GO:0006555 | text = methionine metabolic process}}{{GO|id=GO:0008652 | text = amino acid biosynthetic process}}{{GO|id=GO:0045892 | text = negative regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0045449 | text = regulation of transcription}}{{GO|id=GO:0009086 | text = methionine biosynthetic process}} | |PROCESS={{GO|id=GO:0006555 | text = methionine metabolic process}}{{GO|id=GO:0008652 | text = amino acid biosynthetic process}}{{GO|id=GO:0045892 | text = negative regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0045449 | text = regulation of transcription}}{{GO|id=GO:0009086 | text = methionine biosynthetic process}} | ||
|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | |COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cmaA00 1Cmaa00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cmaB00 1Cmab00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010985 Ipr010985], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002084 Ipr002084]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01340 PF01340]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=17486 d1cmaa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=17487 d1cmab_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A8U6 P0A8U6]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cmaA00 1Cmaa00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cmaB00 1Cmab00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010985 Ipr010985], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002084 Ipr002084]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01340 PF01340]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=17486 d1cmaa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=17487 d1cmab_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A8U6 P0A8U6]</span> | ||
+ | |uPDB=1CMA|CONSURF={{!}}- | ||
+ | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
+ | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
+ | {{!}} '''Toggle Conservation Colors:''' | ||
+ | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
+ | Rows = identical sequences: | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>A [x]</text> | ||
+ | <name>jmb_1cma_A</name> | ||
+ | <title>toggle chain A</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>C [x]</text> | ||
+ | <name>jmb_1cma_C</name> | ||
+ | <title>toggle chain C</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>E [x]</text> | ||
+ | <name>jmb_1cma_E</name> | ||
+ | <title>toggle chain E</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>G [x]</text> | ||
+ | <name>jmb_1cma_G</name> | ||
+ | <title>toggle chain G</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
}} | }} |
Current revision
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1cma, resolution 2.80Å () | |||||||||
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Ligands: | |||||||||
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Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
Coordinates: | save as pdb, mmCIF, xml |