1d06

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{{Seed}}
 
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[[Image:1d06.png|left|200px]]
 
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==STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION==
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The line below this paragraph, containing "STRUCTURE_1d06", creates the "Structure Box" on the page.
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<StructureSection load='1d06' size='340' side='right'caption='[[1d06]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1d06]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sinorhizobium_meliloti Sinorhizobium meliloti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D06 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D06 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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{{STRUCTURE_1d06| PDB=1d06 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d06 OCA], [https://pdbe.org/1d06 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d06 RCSB], [https://www.ebi.ac.uk/pdbsum/1d06 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d06 ProSAT]</span></td></tr>
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</table>
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===STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION===
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== Function ==
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[https://www.uniprot.org/uniprot/FIXL_RHIME FIXL_RHIME] Putative oxygen sensor; modulates the activity of FixJ, a transcriptional activator of nitrogen fixation fixK gene. FixL probably acts as a kinase that phosphorylates FixJ.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 10926518 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/1d06_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_10926518}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1D06 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_meliloti Sinorhizobium meliloti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D06 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d06 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies., Miyatake H, Mukai M, Park SY, Adachi S, Tamura K, Nakamura H, Nakamura K, Tsuchiya T, Iizuka T, Shiro Y, J Mol Biol. 2000 Aug 11;301(2):415-31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10926518 10926518]
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</StructureSection>
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[[Category: Single protein]]
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[[Category: Large Structures]]
[[Category: Sinorhizobium meliloti]]
[[Category: Sinorhizobium meliloti]]
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[[Category: Adachi, S.]]
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[[Category: Adachi S]]
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[[Category: Iizuka, T.]]
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[[Category: Iizuka T]]
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[[Category: Miyatake, H.]]
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[[Category: Miyatake H]]
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[[Category: Mukai, M.]]
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[[Category: Mukai M]]
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[[Category: Nakamura, H.]]
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[[Category: Nakamura H]]
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[[Category: Nakamura, K.]]
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[[Category: Nakamura K]]
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[[Category: Park, S Y.]]
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[[Category: Park S-Y]]
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[[Category: Shiro, Y.]]
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[[Category: Shiro Y]]
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[[Category: Tamura, K.]]
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[[Category: Tamura K]]
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[[Category: Tsuchiya, T.]]
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[[Category: Tsuchiya T]]
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[[Category: High-resolution]]
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[[Category: Histidine kinase]]
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[[Category: Oxygen sensor]]
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[[Category: Pa]]
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[[Category: Two-component system]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 21:54:58 2008''
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Current revision

STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION

PDB ID 1d06

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