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1d7d

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{{Seed}}
 
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[[Image:1d7d.png|left|200px]]
 
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==CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5==
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The line below this paragraph, containing "STRUCTURE_1d7d", creates the "Structure Box" on the page.
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<StructureSection load='1d7d' size='340' side='right'caption='[[1d7d]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1d7d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D7D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D7D FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PG:2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL'>1PG</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
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{{STRUCTURE_1d7d| PDB=1d7d | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d7d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d7d OCA], [https://pdbe.org/1d7d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d7d RCSB], [https://www.ebi.ac.uk/pdbsum/1d7d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d7d ProSAT]</span></td></tr>
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</table>
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===CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5===
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== Function ==
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[https://www.uniprot.org/uniprot/CDH_PHACH CDH_PHACH] Degrades both lignin and cellulose. Oxidizes cellobiose to cellobionolactone.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_10673428}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 10673428 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d7/1d7d_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_10673428}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1D7D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Phanerochaete_chrysosporium Phanerochaete chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D7D OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d7d ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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A new scaffold for binding haem in the cytochrome domain of the extracellular flavocytochrome cellobiose dehydrogenase., Hallberg BM, Bergfors T, Backbro K, Pettersson G, Henriksson G, Divne C, Structure. 2000 Jan 15;8(1):79-88. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10673428 10673428]
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</StructureSection>
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[[Category: Deleted entry]]
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[[Category: Large Structures]]
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[[Category: Phanerochaete chrysosporium]]
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[[Category: Phanerodontia chrysosporium]]
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[[Category: Single protein]]
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[[Category: Backbro K]]
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[[Category: Backbro, K.]]
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[[Category: Bergfors T]]
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[[Category: Bergfors, T.]]
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[[Category: Divne C]]
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[[Category: Divne, C.]]
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[[Category: Hallberg BM]]
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[[Category: Hallberg, B M.]]
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[[Category: B-type cytochrome]]
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[[Category: Beta sandwich]]
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[[Category: Met/his ligation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 22:35:51 2008''
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Current revision

CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5

PDB ID 1d7d

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