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1dck

From Proteopedia

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{{Seed}}
 
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[[Image:1dck.png|left|200px]]
 
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<!--
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==STRUCTURE OF UNPHOSPHORYLATED FIXJ-N COMPLEXED WITH MN2+==
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The line below this paragraph, containing "STRUCTURE_1dck", creates the "Structure Box" on the page.
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<StructureSection load='1dck' size='340' side='right'caption='[[1dck]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1dck]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sinorhizobium_meliloti Sinorhizobium meliloti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DCK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DCK FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=15P:POLYETHYLENE+GLYCOL+(N=34)'>15P</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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{{STRUCTURE_1dck| PDB=1dck | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dck OCA], [https://pdbe.org/1dck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dck RCSB], [https://www.ebi.ac.uk/pdbsum/1dck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dck ProSAT]</span></td></tr>
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</table>
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===STRUCTURE OF UNPHOSPHORYLATED FIXJ-N COMPLEXED WITH MN2+===
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== Function ==
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[https://www.uniprot.org/uniprot/FIXJ_RHIME FIXJ_RHIME] FixJ, when activated by FixL, induces the expression of both nifA, required for activation of classical nif and fix genes, and fixK, required for FixN activation.
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_10647182}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 10647182 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/1dck_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_10647182}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1DCK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_meliloti Sinorhizobium meliloti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DCK OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dck ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Structural transitions in the FixJ receiver domain., Gouet P, Fabry B, Guillet V, Birck C, Mourey L, Kahn D, Samama JP, Structure. 1999 Dec 15;7(12):1517-26. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10647182 10647182]
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</StructureSection>
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[[Category: Single protein]]
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[[Category: Large Structures]]
[[Category: Sinorhizobium meliloti]]
[[Category: Sinorhizobium meliloti]]
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[[Category: Birck, C.]]
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[[Category: Birck C]]
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[[Category: Fabry, B.]]
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[[Category: Fabry B]]
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[[Category: Gouet, P.]]
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[[Category: Gouet P]]
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[[Category: Guillet, V.]]
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[[Category: Guillet V]]
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[[Category: Kahn, D.]]
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[[Category: Kahn D]]
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[[Category: Mourey, L.]]
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[[Category: Mourey L]]
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[[Category: Samama, J P.]]
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[[Category: Samama JP]]
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[[Category: Doubly wound five-stranded beta/alpha fold]]
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[[Category: Nitrogen fixation regulation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 22:49:30 2008''
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Current revision

STRUCTURE OF UNPHOSPHORYLATED FIXJ-N COMPLEXED WITH MN2+

PDB ID 1dck

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