This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1dip

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:50, 20 March 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1dip.png|left|200px]]
 
-
<!--
+
==THE SOLUTION STRUCTURE OF PORCINE DELTA-SLEEP-INDUCING PEPTIDE IMMUNOREACTIVE PEPTIDE, NMR, 10 STRUCTURES==
-
The line below this paragraph, containing "STRUCTURE_1dip", creates the "Structure Box" on the page.
+
<StructureSection load='1dip' size='340' side='right'caption='[[1dip]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1dip]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DIP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DIP FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
-
{{STRUCTURE_1dip| PDB=1dip | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dip OCA], [https://pdbe.org/1dip PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dip RCSB], [https://www.ebi.ac.uk/pdbsum/1dip PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dip ProSAT]</span></td></tr>
-
 
+
</table>
-
===THE SOLUTION STRUCTURE OF PORCINE DELTA-SLEEP-INDUCING PEPTIDE IMMUNOREACTIVE PEPTIDE, NMR, 10 STRUCTURES===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/T22D3_PIG T22D3_PIG] Protects T-cells from IL2 deprivation-induced apoptosis through the inhibition of FOXO3A transcriptional activity that leads to the down-regulation of the pro-apoptotic factor BCL2L11. In macrophages, plays a role in the anti-inflammatory and immunosuppressive effects of glucocorticoids and IL10. In T-cells, inhibits anti-CD3-induced NFKB1 nuclear translocation. In vitro, suppresses AP1 and NFKB1 DNA-binding activities (By similarity).
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_9388238}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 9388238 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/1dip_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_9388238}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1DIP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DIP OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dip ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
Solution structure of porcine delta sleep-inducing peptide immunoreactive peptide A homolog of the shortsighted gene product., Seidel G, Adermann K, Schindler T, Ejchart A, Jaenicke R, Forssmann WG, Rosch P, J Biol Chem. 1997 Dec 5;272(49):30918-27. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9388238 9388238]
+
</StructureSection>
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Adermann, K.]]
+
[[Category: Adermann K]]
-
[[Category: Ejchart, A.]]
+
[[Category: Ejchart A]]
-
[[Category: Forssmann, W G.]]
+
[[Category: Forssmann WG]]
-
[[Category: Jaenicke, R.]]
+
[[Category: Jaenicke R]]
-
[[Category: Roesch, P.]]
+
[[Category: Roesch P]]
-
[[Category: Schindler, T.]]
+
[[Category: Schindler T]]
-
[[Category: Seidel, G.]]
+
[[Category: Seidel G]]
-
[[Category: Acetylation]]
+
-
[[Category: Delta-sleep-inducing peptide immunoreactive peptide]]
+
-
[[Category: Leucine zipper]]
+
-
[[Category: Nmr structure]]
+
-
[[Category: Pig]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:07:14 2008''
+

Current revision

THE SOLUTION STRUCTURE OF PORCINE DELTA-SLEEP-INDUCING PEPTIDE IMMUNOREACTIVE PEPTIDE, NMR, 10 STRUCTURES

PDB ID 1dip

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools